CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_87742
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_87742
T330213_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERZ99880
Sox
67
133
LRPPNGFILYRKDVQQEIMKNNSDVTFKTVSSIASKKWKCESEEKKNFFNSLSRVAHLVYLDICESY
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLOINDRAFT_25196
Rhizophagus irregularis
GLOINDRAFT_25196
I
0.432
GLOINDRAFT_75094
Rhizophagus irregularis
GLOINDRAFT_75094
I
0.509
SOCG_02523
Schizosaccharomyces octosporus
SOCG_02523
I
0.420
FOXG_14478
Fusarium oxysporum
FOXG_14478
N
0.419
FOXG_14807
Fusarium oxysporum
FOXG_14807
N
0.419
FOXG_15002
Fusarium oxysporum
FOXG_15002
N
0.419
GLOINDRAFT_336169
Rhizophagus irregularis
GLOINDRAFT_336169
N
0.485