GYMLUDRAFT_162520 (Gymnopus luxurians)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GYMLUDRAFT_162520 T330462_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ROX1
M00070_2.00 		Saccharomyces cerevisiae
NRAACAATWNN
NNWATTGTTYN		 PBM
Badis et al.(2008)
ROX1_2099 		0.498 0.406
ROX1
M07498_2.00 		Saccharomyces cerevisiae
YYHATTGTTYTS
SARAACAATDRR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1 		0.498 0.406
ROX1
M08607_2.00 		Saccharomyces cerevisiae
BYATTGTN
NACAATRV		 Misc
DeBoer et al.(2011)
YPR065W_1396 		0.498 0.406
ROX1
M11346_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6_01 		0.498 0.406
ROX1
M11347_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6 		0.498 0.406
SRY
M03525_2.00 		Homo sapiens
AACAATANCATTGTT
AACAATGNTATTGTT		 SELEX
Jolma et al.(2013)
SRY_1 		0.422 0.333
SRY
M03526_2.00 		Homo sapiens
AACAATHHNCATTGTT
AACAATGNDDATTGTT		 SELEX
Jolma et al.(2013)
SRY_2 		0.422 0.333
SRY
M03527_2.00 		Homo sapiens
TCAATAMCATTGA
TCAATGKTATTGA		 SELEX
Jolma et al.(2013)
SRY_3 		0.422 0.333
SRY
M03528_2.00 		Homo sapiens
TGAATANCATTCA
TGAATGNTATTCA		 SELEX
Jolma et al.(2013)
SRY_4 		0.422 0.333
SRY
M05898_2.00 		Homo sapiens
NACAATNV
BNATTGTN		 SMiLE-seq
Isakova et al.(2017)
SRY 		0.422 0.333
SRY
M02717_2.00 		Homo sapiens
NDWAACAAW
WTTGTWWHN		 SELEX
Mathelier et al.(2014)
MA0084.1 		0.422 0.333
SRY
M09398_2.00 		Homo sapiens
BWTTGTTWH
DWAACAAWV		 Misc
Kulakovskiy et al.(2013)
SRY_HUMAN.H11MO.0.B 		0.422 0.333
SRY
M11331_2.00 		Homo sapiens
AAWSWMM
KKWSWTT		 Transfac
Matys et al.(2006)
V$SRY_01 		0.422 0.333
SRY
M11332_2.00 		Homo sapiens
HBHWTTGTTWDN
NHWAACAAWDVD		 Transfac
Matys et al.(2006)
V$SRY_02 		0.422 0.333
SRY
M11333_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRY_Q6 		0.422 0.333
SOX4
M01026_2.00 		Homo sapiens
AACAAWGR
YCWTTGTT		 PBM
Scharer et al.(2009)
Sox4 		0.416 0.391
Sox11
M00210_2.00 		Mus musculus
WTTGTBNNN
NNNVACAAW		 PBM
Badis et al.(2009)
Sox11_2266 		0.416 0.391
Sox4
M00213_2.00 		Mus musculus
NNVACAAWD
HWTTGTBNN		 PBM
Badis et al.(2009)
Sox4_2941 		0.416 0.391
SOX4
M03496_2.00 		Homo sapiens
NAACAATTKCAGTGTT
AACACTGMAATTGTTN		 SELEX
Jolma et al.(2013)
SOX4_1 		0.416 0.391
Sox11
M03541_2.00 		Mus musculus
AACAATTKCAGTGTT
AACACTGMAATTGTT		 SELEX
Jolma et al.(2013)
Sox11_1 		0.416 0.391
SOX4
M05765_2.00 		Homo sapiens
NRACAAWGVV
BBCWTTGTYN		 SELEX
Yin et al.(2017)
SOX4_eDBD_HT-SELEX 		0.416 0.391
SOX4
M09388_2.00 		Homo sapiens
BYCTTTGTYYBB
VVRRACAAAGRV		 Misc
Kulakovskiy et al.(2013)
SOX4_HUMAN.H11MO.0.B 		0.416 0.391
Sox4
M09410_2.00 		Mus musculus
BYCTTTGTYYBB
VVRRACAAAGRV		 Misc
Kulakovskiy et al.(2013)
SOX4_MOUSE.H11MO.0.A 		0.416 0.391
Sox4
M09641_2.00 		Mus musculus
BCWTTGTYCN
NGRACAAWGV		 Misc
Heinz et al.(2010)
proB-Sox4_GSE50066 		0.416 0.391
SOX11
M11326_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX11_Q6 		0.416 0.391
SOX4
M11301_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX4_Q3 		0.416 0.391
SOX4
M11302_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX4_Q5_02 		0.416 0.391
SOX4
M11303_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX4_Q5 		0.416 0.391
SOX4
M05766_2.00 		Homo sapiens
NRACAAWGVV
BBCWTTGTYN		 SELEX
Yin et al.(2017)
SOX4_eDBD_Methyl-HT-SELEX 		0.416 0.391
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIK63578 Sox 24 93

Links

Other Sox family TFs
Other Gymnopus luxurians TFs

447 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
mat1-Mc Schizosaccharomyces pombe SPBC23G7.09 D 0.000
PMAA_003200 Talaromyces marneffei PMAA_003200 I 0.000
SMAC_07212 Sordaria macrospora SMAC_07212 I 0.000
SMAC_05404 Sordaria macrospora SMAC_05404 I 0.000
SETTUDRAFT_174840 Setosphaeria turcica SETTUDRAFT_174840 I 0.000
SBOR_9074 Sclerotinia borealis SBOR_9074 I 0.000
S40288_01998 Stachybotrys chartarum S40288_01998 I 0.000
PV08_07043 Exophiala spinifera PV08_07043 I 0.000
PV06_08316 Exophiala oligosperma PV06_08316 I 0.000
PODANS_1_20590 Podospora anserina PODANS_1_20590 I 0.000
SOCG_02523 Schizosaccharomyces octosporus SOCG_02523 I 0.422
PITC_063570 Penicillium italicum PITC_063570 I 0.000
PDE_01613 Penicillium oxalicum PDE_01613 I 0.000
PCH_Pc22g06930 Penicillium rubens PCH_Pc22g06930 I 0.000
PABG_05778 Paracoccidioides brasiliensis PABG_05778 I 0.000
OCS_00196 Ophiocordyceps sinensis OCS_00196 I 0.000
MGG_02978 Magnaporthe oryzae MGG_02978 I 0.000
MBR_08193 Metarhizium brunneum MBR_08193 I 0.000
CIMG_00406 Coccidioides immitis CIMG_00406 I 0.000
TSTA_008530 Talaromyces stipitatus TSTA_008530 I 0.000
PMAA_003200 Penicillium marneffei PMAA_003200 I 0.000
Pc22g06930 Penicillium chrysogenum Pc22g06930 I 0.000
Ocbimv22024932m.g Octopus bimaculoides Ocbimv22024932m.g I 0.000
gw1.41.85.1 Phycomyces blakesleeanus gw1.41.85.1 I 0.000
TVAG_280760 Trichomonas vaginalis TVAG_280760 I 0.000
VHEMI07104 Torrubiella hemipterigena VHEMI07104 I 0.000
VDAG_02444 Verticillium dahliae VDAG_02444 I 0.000
U727_00429890111 Penicillium solitum U727_00429890111 I 0.000
MAM_01740 Metarhizium album MAM_01740 I 0.000
TRIREDRAFT_124341 Trichoderma reesei TRIREDRAFT_124341 I 0.000
TRIATDRAFT_33998 Trichoderma atroviride TRIATDRAFT_33998 I 0.000
TEQG_04869 Trichophyton equinum TEQG_04869 I 0.000
SS1G_04006 Sclerotinia sclerotiorum SS1G_04006 I 0.000
mat3-Mc Schizosaccharomyces pombe SPMTR.04 I 0.000
SPBR_08948 Sporothrix brasiliensis SPBR_08948 I 0.000
mat3-Mc Schizosaccharomyces pombe SPBC1711.02 I 0.000
BGHDH14_bgh03211 Blumeria graminis BGHDH14_bgh03211 I 0.000
EPUS_08057 Endocarpon pusillum EPUS_08057 I 0.000
MAJ_11317 Metarhizium majus MAJ_11317 I 0.000
CPC735_058040 Coccidioides posadasii CPC735_058040 I 0.000
CMQ_5376 Grosmannia clavigera CMQ_5376 I 0.000
CH063_09403 Colletotrichum higginsianum CH063_09403 I 0.000
CGGC5_3189 Colletotrichum gloeosporioides CGGC5_3189 I 0.000
CFIO01_09392 Colletotrichum fioriniae CFIO01_09392 I 0.000
MAT2 Aspergillus nidulans CADANIAG00005695 I 0.000
CSUB01_02050 Colletotrichum sublineola CSUB01_02050 I 0.000
BAUCODRAFT_67524 Baudoinia compniacensis BAUCODRAFT_67524 I 0.000
A1O9_08621 Exophiala aquamarina A1O9_08621 I 0.000
A1O5_13042 Cladophialophora psammophila A1O5_13042 I 0.000
A1O3_06089 Capronia epimyces A1O3_06089 I 0.000
A1O1_07971 Capronia coronata A1O1_07971 I 0.000
SPPG_07085 Spizellomyces punctatus SPPG_07085 I 0.000
SPPG_05561 Spizellomyces punctatus SPPG_05561 I 0.000
GGTG_04697 Gaeumannomyces graminis GGTG_04697 I 0.000
H101_00568 Trichophyton interdigitale H101_00568 I 0.000
GLRG_04643 Colletotrichum graminicola GLRG_04643 I 0.000
GLOINDRAFT_81724 Rhizophagus irregularis GLOINDRAFT_81724 I 0.000
HCBG_05263 Histoplasma capsulatum HCBG_05263 I 0.000
GLOINDRAFT_60750 Rhizophagus irregularis GLOINDRAFT_60750 I 0.000
GLOINDRAFT_50485 Rhizophagus irregularis GLOINDRAFT_50485 I 0.000
EURHEDRAFT_401871 Aspergillus ruber EURHEDRAFT_401871 I 0.000
GLOINDRAFT_44046 Rhizophagus irregularis GLOINDRAFT_44046 I 0.000
FGRRES_08893 Fusarium graminearum FGRRES_08893 I 0.000
HMPREF1120_08862 Exophiala dermatitidis HMPREF1120_08862 I 0.000
FFUJ_05685 Fusarium fujikuroi FFUJ_05685 I 0.000
HMPREF1624_05084 Sporothrix schenckii HMPREF1624_05084 I 0.000
F503_06490 Ophiostoma piceae uamh F503_06490 I 0.000
F503_03625 Ophiostoma piceae uamh F503_03625 I 0.000
MAC_05350 Metarhizium acridum MAC_05350 I 0.000
TRIVIDRAFT_52649 Trichoderma virens TRIVIDRAFT_52649 N 0.000
UCREL1_2891 Eutypa lata UCREL1_2891 N 0.000
CHGG_03580 Chaetomium globosum CHGG_03580 N 0.000
Cob_13096 Colletotrichum orbiculare Cob_13096 N 0.000
CTHT_0001070 Chaetomium thermophilum CTHT_0001070 N 0.000