JAAARDRAFT_119170 (Jaapia argillacea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 JAAARDRAFT_119170 T330709_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CRC
M07266_2.00 		Arabidopsis thaliana
TWATCATW
WATGATWA		 Dap-seq
OMalley et al.(2016)
CRC_col_a 		0.433 0.383
CRC
M07267_2.00 		Arabidopsis thaliana
GGTTAGTGTTTTGGAGTCGAATATGACTTG
CAAGTCATATTCGACTCCAAAACACTAACC		 Dap-seq
OMalley et al.(2016)
CRC_colamp_a 		0.433 0.383
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KDQ63187 Sox 4 50

Links

Other Sox family TFs
Other Jaapia argillacea TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARF5 Arabidopsis thaliana AT1G19850 D
ARF8 Arabidopsis thaliana AT5G37020 D
AMTR_s00007p00267580 Amborella trichopoda AMTR_s00007p00267580 I
AMTR_s00092p00072950 Amborella trichopoda AMTR_s00092p00072950 I
ARF19 Arabidopsis thaliana AT1G19220 I
ARF6 Arabidopsis thaliana AT1G30330 I
NPH4 Arabidopsis thaliana AT5G20730 I
ARF6 Oryza indica BGIOSGA007604 I
BGIOSGA014119 Oryza indica BGIOSGA014119 I
BGIOSGA026655 Oryza indica BGIOSGA026655 I
BGIOSGA035840 Oryza indica BGIOSGA035840 I
Bo3g148950 Brassica oleracea Bo3g148950 I
Bo4g136370 Brassica oleracea Bo4g136370 I
Bo5g027250 Brassica oleracea Bo5g027250 I
Bo5g027930 Brassica oleracea Bo5g027930 I
Bo5g062810 Brassica oleracea Bo5g062810 I
Bo6g099440 Brassica oleracea Bo6g099440 I
Bo7g062090 Brassica oleracea Bo7g062090 I
Bo8g069820 Brassica oleracea Bo8g069820 I
Bra002327 Brassica rapa Bra002327 I
Bra004125 Brassica rapa Bra004125 I
Bra010776 Brassica rapa Bra010776 I
Bra012190 Brassica rapa Bra012190 I
Bra016492 Brassica rapa Bra016492 I
Bra025720 Brassica rapa Bra025720 I
Bra025775 Brassica rapa Bra025775 I
Bra028110 Brassica rapa Bra028110 I
BRADI1G34340 Brachypodium distachyon BRADI1G34340 I
BRADI1G46602 Brachypodium distachyon BRADI1G46602 I
BRADI3G04920 Brachypodium distachyon BRADI3G04920 I
BRADI4G01730 Brachypodium distachyon BRADI4G01730 I
BRADI5G25157 Brachypodium distachyon BRADI5G25157 I
BRADI5G25767 Brachypodium distachyon BRADI5G25767 I
F775_07729 Aegilops tauschii F775_07729 I
F775_09991 Aegilops tauschii F775_09991 I
MP Arabidopsis lyrata fgenesh2_kg.1__2164__AT1G19850.1 I
ARF6 Arabidopsis lyrata fgenesh2_kg.1__3210__AT1G30330.2 I
NPH4 Arabidopsis lyrata fgenesh2_kg.6__2115__AT5G20730.1 I
ARF8 Arabidopsis lyrata fgenesh2_kg.7__3131__AT5G37020.1 I
GLYMA01G00510 Glycine max GLYMA01G00510 I
GLYMA02G45100 Glycine max GLYMA02G45100 I
GLYMA05G27580 Glycine max GLYMA05G27580 I
GLYMA05G36430 Glycine max GLYMA05G36430 I
GLYMA08G03141 Glycine max GLYMA08G03141 I
GLYMA08G10550 Glycine max GLYMA08G10550 I
GLYMA13G29320 Glycine max GLYMA13G29320 I
GLYMA14G03650 Glycine max GLYMA14G03650 I
GLYMA15G09750 Glycine max GLYMA15G09750 I
GLYMA18G05330 Glycine max GLYMA18G05330 I
GRMZM2G034840 Zea mays GRMZM2G034840 I
GRMZM2G073750 Zea mays GRMZM2G073750 I
GRMZM2G081158 Zea mays GRMZM2G081158 I
GRMZM2G086949 Zea mays GRMZM2G086949 I
GRMZM2G102845 Zea mays GRMZM2G102845 I
GRMZM2G317900 Zea mays GRMZM2G317900 I
GSMUA_Achr11G01610_001 Musa acuminata GSMUA_Achr11G01610_001 I
GSMUA_Achr11G25770_001 Musa acuminata GSMUA_Achr11G25770_001 I
GSMUA_Achr1G20040_001 Musa acuminata GSMUA_Achr1G20040_001 I
GSMUA_Achr3G10240_001 Musa acuminata GSMUA_Achr3G10240_001 I
GSMUA_Achr3G23290_001 Musa acuminata GSMUA_Achr3G23290_001 I
GSMUA_Achr5G00590_001 Musa acuminata GSMUA_Achr5G00590_001 I
GSMUA_Achr5G05010_001 Musa acuminata GSMUA_Achr5G05010_001 I
GSMUA_Achr6G19850_001 Musa acuminata GSMUA_Achr6G19850_001 I
GSMUA_Achr8G13630_001 Musa acuminata GSMUA_Achr8G13630_001 I
GSMUA_Achr8G23850_001 Musa acuminata GSMUA_Achr8G23850_001 I
GSMUA_Achr9G14090_001 Musa acuminata GSMUA_Achr9G14090_001 I
GSMUA_AchrUn_randomG06460_001 Musa acuminata GSMUA_AchrUn_randomG06460_001 I
LPERR02G03100 Leersia perrieri LPERR02G03100 I
LPERR02G04280 Leersia perrieri LPERR02G04280 I
LPERR04G24670 Leersia perrieri LPERR04G24670 I
LPERR08G17530 Leersia perrieri LPERR08G17530 I
LPERR12G15750 Leersia perrieri LPERR12G15750 I
MLOC_14584 Hordeum vulgare MLOC_14584 I
MLOC_51932 Hordeum vulgare MLOC_51932 I
MLOC_55345 Hordeum vulgare MLOC_55345 I
MLOC_58330 Hordeum vulgare MLOC_58330 I
MLOC_66152 Hordeum vulgare MLOC_66152 I
MLOC_73144 Hordeum vulgare MLOC_73144 I
MTR_1g024025 Medicago truncatula MTR_1g024025 I
MTR_2g018690 Medicago truncatula MTR_2g018690 I
MTR_2g043250 Medicago truncatula MTR_2g043250 I
MTR_4g124900 Medicago truncatula MTR_4g124900 I
MTR_5g076270 Medicago truncatula MTR_5g076270 I
MTR_8g101360 Medicago truncatula MTR_8g101360 I
OB02G13010 Oryza brachyantha OB02G13010 I
OB04G35570 Oryza brachyantha OB04G35570 I
OB04G36140 Oryza brachyantha OB04G36140 I
OB06G15720 Oryza brachyantha OB06G15720 I
OB12G25550 Oryza brachyantha OB12G25550 I
OBART02G03410 Oryza barthii OBART02G03410 I
OBART02G04960 Oryza barthii OBART02G04960 I
OBART04G29160 Oryza barthii OBART04G29160 I
OBART08G20780 Oryza barthii OBART08G20780 I
OBART12G18720 Oryza barthii OBART12G18720 I
OGLUM02G03280 Oryza glumaepatula OGLUM02G03280 I
OGLUM02G04770 Oryza glumaepatula OGLUM02G04770 I
OGLUM04G28480 Oryza glumaepatula OGLUM04G28480 I
OGLUM04G29070 Oryza glumaepatula OGLUM04G29070 I
OGLUM08G22050 Oryza glumaepatula OGLUM08G22050 I
OGLUM12G20370 Oryza glumaepatula OGLUM12G20370 I
OLONG_005008 Oryza longistaminata OLONG_005008 I
OLONG_020465 Oryza longistaminata OLONG_020465 I
OLONG_021742 Oryza longistaminata OLONG_021742 I
OLONG_022882 Oryza longistaminata OLONG_022882 I
OLONG_025769 Oryza longistaminata OLONG_025769 I
OMERI02G01870 Oryza meridionalis OMERI02G01870 I
OMERI02G04100 Oryza meridionalis OMERI02G04100 I
OMERI02G05780 Oryza meridionalis OMERI02G05780 I
OMERI04G24630 Oryza meridionalis OMERI04G24630 I
OMERI12G13970 Oryza meridionalis OMERI12G13970 I
ONIVA02G03290 Oryza nivara ONIVA02G03290 I
ONIVA02G05150 Oryza nivara ONIVA02G05150 I
ONIVA04G27140 Oryza nivara ONIVA04G27140 I
ONIVA04G27670 Oryza nivara ONIVA04G27670 I
ONIVA08G23730 Oryza nivara ONIVA08G23730 I
ONIVA12G17670 Oryza nivara ONIVA12G17670 I
OPUNC02G02660 Oryza punctata OPUNC02G02660 I
OPUNC02G04120 Oryza punctata OPUNC02G04120 I
OPUNC04G26100 Oryza punctata OPUNC04G26100 I
OPUNC04G26690 Oryza punctata OPUNC04G26690 I
OPUNC08G18850 Oryza punctata OPUNC08G18850 I
OPUNC12G16920 Oryza punctata OPUNC12G16920 I
ORGLA02G0031900 Oryza glaberrima ORGLA02G0031900 I
ORGLA02G0045800 Oryza glaberrima ORGLA02G0045800 I
ORGLA04G0248600 Oryza glaberrima ORGLA04G0248600 I
ORGLA04G0254900 Oryza glaberrima ORGLA04G0254900 I
ORGLA08G0183900 Oryza glaberrima ORGLA08G0183900 I
ORGLA12G0159700 Oryza glaberrima ORGLA12G0159700 I
ORUFI02G03320 Oryza rufipogon ORUFI02G03320 I
ORUFI02G05060 Oryza rufipogon ORUFI02G05060 I
ORUFI04G30870 Oryza rufipogon ORUFI04G30870 I
ORUFI08G23260 Oryza rufipogon ORUFI08G23260 I
ORUFI12G20920 Oryza rufipogon ORUFI12G20920 I
OS02G0141100 Oryza sativa OS02G0141100 I
ARF6 Oryza sativa OS02G0164900 I
OS04G0664400 Oryza sativa OS04G0664400 I
ARF12 Oryza sativa OS04G0671900 I
OS08G0520550 Oryza sativa OS08G0520550 I
ARF25 Oryza sativa OS12G0613700 I
PGSC0003DMG400003771 Solanum tuberosum PGSC0003DMG400003771 I
PGSC0003DMG401018664 Solanum tuberosum PGSC0003DMG401018664 I
POPTR_0001s36900 Populus trichocarpa POPTR_0001s36900 I
POPTR_0002s05590 Populus trichocarpa POPTR_0002s05590 I
POPTR_0005s22930 Populus trichocarpa POPTR_0005s22930 I
POPTR_0006s07740 Populus trichocarpa POPTR_0006s07740 I
POPTR_0006s14070 Populus trichocarpa POPTR_0006s14070 I
POPTR_0011s09450 Populus trichocarpa POPTR_0011s09450 I
POPTR_0017s01870 Populus trichocarpa POPTR_0017s01870 I
POPTR_0018s07420 Populus trichocarpa POPTR_0018s07420 I
POPTR_0018s14300 Populus trichocarpa POPTR_0018s14300 I
PRUPE_ppa000479mg Prunus persica PRUPE_ppa000479mg I
PRUPE_ppa000708mg Prunus persica PRUPE_ppa000708mg I
PRUPE_ppa000946mg Prunus persica PRUPE_ppa000946mg I
PRUPE_ppa001069mg Prunus persica PRUPE_ppa001069mg I
PRUPE_ppa001179mg Prunus persica PRUPE_ppa001179mg I
Sb04g003240 Sorghum bicolor Sb04g003240 I
Sb06g031900 Sorghum bicolor Sb06g031900 I
Sb07g027080 Sorghum bicolor Sb07g027080 I
Sb08g021460 Sorghum bicolor Sb08g021460 I
Sb10g027220 Sorghum bicolor Sb10g027220 I
Sb10g029130 Sorghum bicolor Sb10g029130 I
SELMODRAFT_179736 Selaginella moellendorffii SELMODRAFT_179736 I
SELMODRAFT_451392 Selaginella moellendorffii SELMODRAFT_451392 I
SELMODRAFT_451395 Selaginella moellendorffii SELMODRAFT_451395 I
SELMODRAFT_451397 Selaginella moellendorffii SELMODRAFT_451397 I
Si005753m.g Setaria italica Si005753m.g I
Si013155m.g Setaria italica Si013155m.g I
Si021121m.g Setaria italica Si021121m.g I
Solyc02g037530.2 Solanum lycopersicum Solyc02g037530.2 I
Solyc04g081240.2 Solanum lycopersicum Solyc04g081240.2 I
TCM_001906 Theobroma cacao TCM_001906 I
TCM_017488 Theobroma cacao TCM_017488 I
TCM_029410 Theobroma cacao TCM_029410 I
TCM_037484 Theobroma cacao TCM_037484 I
Traes_2AL_05ECC440C Triticum aestivum Traes_2AL_05ECC440C I
Traes_2AL_A7941CB12 Triticum aestivum Traes_2AL_A7941CB12 I
Traes_2BL_E322FD546 Triticum aestivum Traes_2BL_E322FD546 I
Traes_2DL_8434C0251 Triticum aestivum Traes_2DL_8434C0251 I
Traes_2DL_FBE64209C Triticum aestivum Traes_2DL_FBE64209C I
Traes_6AS_967D58FB4 Triticum aestivum Traes_6AS_967D58FB4 I
Traes_6BS_444DFA94E Triticum aestivum Traes_6BS_444DFA94E I
Traes_6DS_8BE5BE6AC Triticum aestivum Traes_6DS_8BE5BE6AC I
Traes_6DS_F95C12EBB Triticum aestivum Traes_6DS_F95C12EBB I
Traes_7AL_1415D04BF Triticum aestivum Traes_7AL_1415D04BF I
Traes_7AL_F36D340F4 Triticum aestivum Traes_7AL_F36D340F4 I
Traes_7AS_582E3076D Triticum aestivum Traes_7AS_582E3076D I
Traes_7BL_66296695F Triticum aestivum Traes_7BL_66296695F I
Traes_7BS_F44A273F8 Triticum aestivum Traes_7BS_F44A273F8 I
Traes_7DL_343A252DC Triticum aestivum Traes_7DL_343A252DC I
Traes_7DL_C89614A4D Triticum aestivum Traes_7DL_C89614A4D I
Traes_7DS_1948388F8 Triticum aestivum Traes_7DS_1948388F8 I
TRIUR3_25750 Triticum urartu TRIUR3_25750 I
ARF6 Vitis vinifera VIT_10s0003g04100 I
VIT_11s0016g00640 Vitis vinifera VIT_11s0016g00640 I
MP Vitis vinifera VIT_18s0001g13930 I
Ca_05025 Cicer arietinum Ca_05025 I
Ca_10748 Cicer arietinum Ca_10748 I
Ca_15694 Cicer arietinum Ca_15694 I
Cla009963 Citrullus lanatus Cla009963 I
Cla019844 Citrullus lanatus Cla019844 I
Cla021128 Citrullus lanatus Cla021128 I
Pm006237 Prunus mume Pm006237 I
Pm008963 Prunus mume Pm008963 I
Pm010467 Prunus mume Pm010467 I
Pm014818 Prunus mume Pm014818 I
Pm027119 Prunus mume Pm027119 I
29599.m000177 Ricinus communis 29599.m000177 I
29739.m003713 Ricinus communis 29739.m003713 I
29769.m000463 Ricinus communis 29769.m000463 I
30170.m014161 Ricinus communis 30170.m014161 I
cassava2408.valid.m1 Manihot esculenta cassava2408.valid.m1 I
cassava25060.valid.m1 Manihot esculenta cassava25060.valid.m1 I
cassava29103.valid.m1 Manihot esculenta cassava29103.valid.m1 I
cassava29104.valid.m1 Manihot esculenta cassava29104.valid.m1 I
cassava30265.valid.m1 Manihot esculenta cassava30265.valid.m1 I
cassava30266.valid.m1 Manihot esculenta cassava30266.valid.m1 I
cassava32201.m1 Manihot esculenta cassava32201.m1 I
cassava35541.valid.m1 Manihot esculenta cassava35541.valid.m1 I
cassava45001.m1 Manihot esculenta cassava45001.m1 I
Cucsa.047990 Cucumis sativus Cucsa.047990 I
Cucsa.152170 Cucumis sativus Cucsa.152170 I
Cucsa.342870 Cucumis sativus Cucsa.342870 I
e_gw1.119.103.1 Physcomitrella patens e_gw1.119.103.1 I
mgf003543m Mimulus guttatus mgf003543m I
mgf005961m Mimulus guttatus mgf005961m I
mgf007038m Mimulus guttatus mgf007038m I
mgf007171m Mimulus guttatus mgf007171m I
mgf012918m Mimulus guttatus mgf012918m I
mgf023734m Mimulus guttatus mgf023734m I
mgf025960m Mimulus guttatus mgf025960m I
Aquca_002_01425 Aquilegia coerulea Aquca_002_01425 I
Aquca_007_00393 Aquilegia coerulea Aquca_007_00393 I
Aquca_022_00246 Aquilegia coerulea Aquca_022_00246 I
Bostr.15697s0332 Boechera stricta Bostr.15697s0332 I
Bostr.26527s0132 Boechera stricta Bostr.26527s0132 I
Bostr.7128s0527 Boechera stricta Bostr.7128s0527 I
Bostr.7128s0585 Boechera stricta Bostr.7128s0585 I
Cagra.1508s0171 Capsella grandiflora Cagra.1508s0171 I
Cagra.1796s0004 Capsella grandiflora Cagra.1796s0004 I
Cagra.1961s0022 Capsella grandiflora Cagra.1961s0022 I
Cagra.1961s0078 Capsella grandiflora Cagra.1961s0078 I
Carubv10008159m.g Capsella rubella Carubv10008159m.g I
Carubv10008239m.g Capsella rubella Carubv10008239m.g I
Carubv10008258m.g Capsella rubella Carubv10008258m.g I
Ciclev10007292m.g Citrus clementina Ciclev10007292m.g I
Ciclev10011065m.g Citrus clementina Ciclev10011065m.g I
Ciclev10014198m.g Citrus clementina Ciclev10014198m.g I
Ciclev10014200m.g Citrus clementina Ciclev10014200m.g I
Eucgr.A02065 Eucalyptus grandis Eucgr.A02065 I
Eucgr.F02090 Eucalyptus grandis Eucgr.F02090 I
evm.TU.supercontig_17.53 Carica papaya evm.TU.supercontig_17.53 I
evm.TU.supercontig_261.2 Carica papaya evm.TU.supercontig_261.2 I
evm.TU.supercontig_26.24 Carica papaya evm.TU.supercontig_26.24 I
gene22728-v1.0-hybrid Fragaria vesca gene22728-v1.0-hybrid I
gene30394-v1.0-hybrid Fragaria vesca gene30394-v1.0-hybrid I
gene31631-v1.0-hybrid Fragaria vesca gene31631-v1.0-hybrid I
Gorai.001G017000 Gossypium raimondii Gorai.001G017000 I
Gorai.002G124400 Gossypium raimondii Gorai.002G124400 I
Gorai.006G008700 Gossypium raimondii Gorai.006G008700 I
Gorai.008G054600 Gossypium raimondii Gorai.008G054600 I
Gorai.008G097200 Gossypium raimondii Gorai.008G097200 I
Gorai.009G037100 Gossypium raimondii Gorai.009G037100 I
Gorai.009G152700 Gossypium raimondii Gorai.009G152700 I
Gorai.010G091300 Gossypium raimondii Gorai.010G091300 I
Gorai.011G048200 Gossypium raimondii Gorai.011G048200 I
Gorai.012G009000 Gossypium raimondii Gorai.012G009000 I
Lus10007386.g Linum usitatissimum Lus10007386.g I
Lus10010969.g Linum usitatissimum Lus10010969.g I
Lus10017640.g Linum usitatissimum Lus10017640.g I
Lus10017641.g Linum usitatissimum Lus10017641.g I
Lus10022943.g Linum usitatissimum Lus10022943.g I
Lus10024320.g Linum usitatissimum Lus10024320.g I
Lus10027600.g Linum usitatissimum Lus10027600.g I
Lus10031354.g Linum usitatissimum Lus10031354.g I
Lus10033597.g Linum usitatissimum Lus10033597.g I
Lus10033598.g Linum usitatissimum Lus10033598.g I
Lus10033635.g Linum usitatissimum Lus10033635.g I
MDP0000143749 Malus domestica MDP0000143749 I
MDP0000153538 Malus domestica MDP0000153538 I
MDP0000185253 Malus domestica MDP0000185253 I
MDP0000211459 Malus domestica MDP0000211459 I
MDP0000232417 Malus domestica MDP0000232417 I
MDP0000268306 Malus domestica MDP0000268306 I
MDP0000319957 Malus domestica MDP0000319957 I
MDP0000876321 Malus domestica MDP0000876321 I
orange1.1g001969m.g Citrus sinensis orange1.1g001969m.g I
orange1.1g002390m.g Citrus sinensis orange1.1g002390m.g I
orange1.1g002624m.g Citrus sinensis orange1.1g002624m.g I
orange1.1g003544m.g Citrus sinensis orange1.1g003544m.g I
Pavir.Cb00027 Panicum virgatum Pavir.Cb00027 I
Pavir.Da01885 Panicum virgatum Pavir.Da01885 I
Pavir.Fa00483 Panicum virgatum Pavir.Fa00483 I
Pavir.Fb01896 Panicum virgatum Pavir.Fb01896 I
Pavir.Ga00157 Panicum virgatum Pavir.Ga00157 I
Pavir.Gb00117 Panicum virgatum Pavir.Gb00117 I
SapurV1A.0001s2530 Salix purpurea SapurV1A.0001s2530 I
SapurV1A.0025s0600 Salix purpurea SapurV1A.0025s0600 I
SapurV1A.0030s0180 Salix purpurea SapurV1A.0030s0180 I
SapurV1A.0076s0280 Salix purpurea SapurV1A.0076s0280 I
SapurV1A.0147s0210 Salix purpurea SapurV1A.0147s0210 I
SapurV1A.0289s0180 Salix purpurea SapurV1A.0289s0180 I
SapurV1A.0355s0030 Salix purpurea SapurV1A.0355s0030 I
SapurV1A.0521s0030 Salix purpurea SapurV1A.0521s0030 I
SapurV1A.0870s0230 Salix purpurea SapurV1A.0870s0230 I
SapurV1A.1257s0090 Salix purpurea SapurV1A.1257s0090 I
SapurV1A.2095s0020 Salix purpurea SapurV1A.2095s0020 I
Thhalv10006635m.g Eutrema salsugineum Thhalv10006635m.g I
Thhalv10006747m.g Eutrema salsugineum Thhalv10006747m.g I
Thhalv10006748m.g Eutrema salsugineum Thhalv10006748m.g I
Thhalv10012513m.g Eutrema salsugineum Thhalv10012513m.g I
PK17611.1 Cannabis sativa PK17611.1 I
PK26077.1 Cannabis sativa PK26077.1 I
PK27862.1 Cannabis sativa PK27862.1 I
chr4.CM0006.290.nc Lotus japonicus chr4.CM0006.290.nc I
LjSGA_022280.1 Lotus japonicus LjSGA_022280.1 I
LjSGA_069146.1 Lotus japonicus LjSGA_069146.1 I
PDK_20s1354161g001 Phoenix dactylifera PDK_20s1354161g001 I
PDK_20s1410001g001 Phoenix dactylifera PDK_20s1410001g001 I
PDK_20s1535431g002 Phoenix dactylifera PDK_20s1535431g002 I
Cucsa.117430 Cucumis sativus Cucsa.117430 N