KUCA_T00001555001 (Kuraishia capsulata)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 KUCA_T00001555001 T330819_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP6A
M01566_2.00 		Saccharomyces cerevisiae
NHRYWWWN
NWWWRYDN		 PBM
Zhu et al.(2009)
Nhp6a 		0.599 0.725
NHP6A
M08606_2.00 		Saccharomyces cerevisiae
DNDHNNWTATATADWRDNNDN
NHNNHYWHTATATAWNNDHNH		 Misc
DeBoer et al.(2011)
YPR052C_879 		0.599 0.725
NHP6B
M01565_2.00 		Saccharomyces cerevisiae
NNWHWRYDNN
NNHRYWDWNN		 PBM
Zhu et al.(2009)
Nhp6b 		0.599 0.681
NHP6B
M08603_2.00 		Saccharomyces cerevisiae
HNTHHNWWTATAWWWWRNDN
NHNYWWWWTATAWWNDDAND		 Misc
DeBoer et al.(2011)
YBR089C-A_792 		0.599 0.681
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CDK25585 Sox 18 86

Links

Other Sox family TFs
Other Kuraishia capsulata TFs

358 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_3g096140 Medicago truncatula MTR_3g096140 N 0.000
POPTR_0005s06040 Populus trichocarpa POPTR_0005s06040 N 0.000
Ca_04187 Cicer arietinum Ca_04187 N 0.000
Ca_09673 Cicer arietinum Ca_09673 N 0.000
chr4.CM0680.260.nc Lotus japonicus chr4.CM0680.260.nc N 0.000
LjSGA_024981.1 Lotus japonicus LjSGA_024981.1 N 0.000