CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Moror_4096
(
Moniliophthora roreri
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
Moror_4096
T331338_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ROX1
M00070_2.00
Saccharomyces cerevisiae
NRAACAATWNN
NNWATTGTTYN
PBM
Badis et al.(2008)
ROX1_2099
0.420
0.333
ROX1
M07498_2.00
Saccharomyces cerevisiae
YYHATTGTTYTS
SARAACAATDRR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1
0.420
0.333
ROX1
M08607_2.00
Saccharomyces cerevisiae
BYATTGTN
NACAATRV
Misc
DeBoer et al.(2011)
YPR065W_1396
0.420
0.333
ROX1
M11346_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6_01
0.420
0.333
ROX1
M11347_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6
0.420
0.333
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESK90738
Sox
8
76
VKRPPNSFMIFRAEKSRELKDQHGIESQGMVSGLAARMWAQIDPQTKAEYEAKAEVKKAEHFRANPGYV
Links
Other
Sox
family TFs
Other
Moniliophthora roreri
TFs
189 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACUA015517
Anopheles culicifacies
ACUA015517
N
ASIS000460
Anopheles sinensis
ASIS000460
N
AQUA001242
Anopheles quadriannulatus
AQUA001242
N
AMIN009258
Anopheles minimus
AMIN009258
N
AMEM007153
Anopheles merus
AMEM007153
N
AMEC005990
Anopheles melas
AMEC005990
N
AFAF000263
Anopheles farauti
AFAF000263
N
AEPI007014
Anopheles epiroticus
AEPI007014
N
ADIR005231
Anopheles dirus
ADIR005231
N
CpipJ_CPIJ006000
Culex pipiens
CpipJ_CPIJ006000
N
ACHR010056
Anopheles christyi
ACHR010056
N
AATE000184
Anopheles atroparvus
AATE000184
N
AARA005409
Anopheles arabiensis
AARA005409
N
AALB006980
Anopheles albimanus
AALB006980
N
CPIJ006000
Culex quinquefasciatus
CPIJ006000
N
AGAP010938
Anopheles gambiae
AGAP010938
N
ADAC003797
Anopheles darlingi
ADAC003797
N