MTR_8g073345 (Medicago truncatula)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 MTR_8g073345 T331387_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMG-1
M02720_2.00 		Pisum sativum
STYGTDHTY
RADHACRAS		 SELEX
Mathelier et al.(2014)
MA0044.1 		0.604 0.667
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH20353 Sox 37 106
KEH20354 Sox 37 106

Links

Other Sox family TFs
Other Medicago truncatula TFs

290 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa007888mg Prunus persica PRUPE_ppa007888mg N 0.000
TCM_040405 Theobroma cacao TCM_040405 N 0.000
Pm028194 Prunus mume Pm028194 N 0.000
Gorai.010G127900 Gossypium raimondii Gorai.010G127900 N 0.000