CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCAS_0B03190
(
Naumovozyma castellii
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
NCAS_0B03190
T331437_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HMO1
M11344_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$_HMO1_01
0.609
0.855
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCC68403
Sox
111
184
PKKPLTVFFAYSAYVRQELRDERQRNGLPPLSSTEITQEISKKWKELNDTEKEKWKQAYNIELEHYQVEKQKYL
Links
Other
Sox
family TFs
Other
Naumovozyma castellii
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSMPUG00000006974
Mustela putorius furo
ENSMPUG00000006974
N
Ogr14760
Ophisaurus gracilis
Ogr14760
N
Myotis_brandtii_HES3_10024028
Myotis brandtii
Myotis_brandtii_HES3_10024028
N
ENSBTAP00000034011-D1
Bos grunniens
ENSBTAP00000034011-D1
N
Cmyd_10015908
Chelonia mydas
Cmyd_10015908
N
ENSSTOG00000010776
Ictidomys tridecemlineatus
ENSSTOG00000010776
N
HES3
Sus scrofa
ENSSSCG00000003370
N
HES3
Pteropus vampyrus
ENSPVAG00000009777
N
HES3
Oryctolagus cuniculus
ENSOCUG00000028151
N
ENSOARG00000012818
Ovis aries
ENSOARG00000012818
N
ENSAMEG00000009841
Ailuropoda melanoleuca
ENSAMEG00000009841
N
HES3
Myotis lucifugus
ENSMLUG00000014815
N
HES3
Loxodonta africana
ENSLAFG00000006355
N
HES3
Felis catus
ENSFCAG00000028408
N
HES3
Erinaceus europaeus
ENSEEUG00000005956
N
HES3
Equus caballus
ENSECAG00000024724
N
HES3
Dasypus novemcinctus
ENSDNOG00000032069
N
HES3
Cavia porcellus
ENSCPOG00000026623
N
HES3
Canis familiaris
ENSCAFG00000019571
N