OMERI01G23390 (Oryza meridionalis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 OMERI01G23390 T331626_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI01G23390.1 Sox 49 118

Links

Other Sox family TFs
Other Oryza meridionalis TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ERF15 Arabidopsis thaliana AT2G31230 D
ERF095 Arabidopsis thaliana AT3G23220 D
ERF1B Arabidopsis thaliana AT3G23240 D
ERF1A Arabidopsis thaliana AT4G17500 D
ERF106 Arabidopsis thaliana AT5G07580 D
ERF2 Arabidopsis thaliana AT5G47220 D
Q5Y836_TOBAC Nicotiana tabacum Q5Y836_TOBAC D
ERF107 Arabidopsis thaliana AT5G61590 I
BGIOSGA009392 Oryza indica BGIOSGA009392 I
Bo1g017590 Brassica oleracea Bo1g017590 I
Bo1g102210 Brassica oleracea Bo1g102210 I
Bo2g132270 Brassica oleracea Bo2g132270 I
Bo4g052480 Brassica oleracea Bo4g052480 I
Bo4g176080 Brassica oleracea Bo4g176080 I
Bo7g040820 Brassica oleracea Bo7g040820 I
Bo7g098850 Brassica oleracea Bo7g098850 I
Bo8g049470 Brassica oleracea Bo8g049470 I
Bo8g115580 Brassica oleracea Bo8g115580 I
Bo9g175610 Brassica oleracea Bo9g175610 I
Bra009250 Brassica rapa Bra009250 I
Bra012939 Brassica rapa Bra012939 I
Bra014924 Brassica rapa Bra014924 I
Bra018271 Brassica rapa Bra018271 I
Bra021047 Brassica rapa Bra021047 I
Bra021048 Brassica rapa Bra021048 I
Bra021712 Brassica rapa Bra021712 I
Bra022115 Brassica rapa Bra022115 I
Bra023745 Brassica rapa Bra023745 I
Bra023746 Brassica rapa Bra023746 I
Bra028690 Brassica rapa Bra028690 I
Bra032512 Brassica rapa Bra032512 I
Bra040159 Brassica rapa Bra040159 I
BRADI3G50490 Brachypodium distachyon BRADI3G50490 I
F775_22020 Aegilops tauschii F775_22020 I
F775_52314 Aegilops tauschii F775_52314 I
fgenesh2_kg.3__2537__AT3G23220.1 Arabidopsis lyrata fgenesh2_kg.3__2537__AT3G23220.1 I
ATERF15 Arabidopsis lyrata fgenesh2_kg.4__1110__AT2G31230.1 I
ATERF-1 Arabidopsis lyrata fgenesh2_kg.7__2559__AT4G17500.1 I
fgenesh2_kg.8__2142__AT5G61590.1 Arabidopsis lyrata fgenesh2_kg.8__2142__AT5G61590.1 I
GLYMA01G41520 Glycine max GLYMA01G41520 I
GLYMA03G26310 Glycine max GLYMA03G26310 I
GLYMA03G26530 Glycine max GLYMA03G26530 I
GLYMA05G05180 Glycine max GLYMA05G05180 I
GLYMA10G04170 Glycine max GLYMA10G04170 I
GLYMA10G23460 Glycine max GLYMA10G23460 I
GLYMA11G03910 Glycine max GLYMA11G03910 I
GLYMA13G18340 Glycine max GLYMA13G18340 I
GLYMA17G15480 Glycine max GLYMA17G15480 I
GLYMA19G34670 Glycine max GLYMA19G34670 I
GLYMA20G16920 Glycine max GLYMA20G16920 I
GRMZM2G123119 Zea mays GRMZM2G123119 I
GRMZM2G381441 Zea mays GRMZM2G381441 I
GRMZM2G466044 Zea mays GRMZM2G466044 I
GSMUA_Achr11G20930_001 Musa acuminata GSMUA_Achr11G20930_001 I
GSMUA_Achr3G13010_001 Musa acuminata GSMUA_Achr3G13010_001 I
GSMUA_Achr5G12530_001 Musa acuminata GSMUA_Achr5G12530_001 I
GSMUA_Achr5G21050_001 Musa acuminata GSMUA_Achr5G21050_001 I
LPERR03G35710 Leersia perrieri LPERR03G35710 I
MLOC_77420 Hordeum vulgare MLOC_77420 I
MTR_1g069985 Medicago truncatula MTR_1g069985 I
MTR_1g070000 Medicago truncatula MTR_1g070000 I
MTR_1g070015 Medicago truncatula MTR_1g070015 I
MTR_1g070020 Medicago truncatula MTR_1g070020 I
MTR_1g070045 Medicago truncatula MTR_1g070045 I
MTR_4g100380 Medicago truncatula MTR_4g100380 I
OBART03G41810 Oryza barthii OBART03G41810 I
OGLUM03G41640 Oryza glumaepatula OGLUM03G41640 I
OLONG_002067 Oryza longistaminata OLONG_002067 I
OMERI03G15490 Oryza meridionalis OMERI03G15490 I
ONIVA01G48030 Oryza nivara ONIVA01G48030 I
ORGLA03G0387300 Oryza glaberrima ORGLA03G0387300 I
ORUFI03G43580 Oryza rufipogon ORUFI03G43580 I
OS03G0860100 Oryza sativa OS03G0860100 I
PGSC0003DMG400002272 Solanum tuberosum PGSC0003DMG400002272 I
PGSC0003DMG400010285 Solanum tuberosum PGSC0003DMG400010285 I
PGSC0003DMG400013255 Solanum tuberosum PGSC0003DMG400013255 I
PGSC0003DMG400013256 Solanum tuberosum PGSC0003DMG400013256 I
PGSC0003DMG400013257 Solanum tuberosum PGSC0003DMG400013257 I
PGSC0003DMG400013402 Solanum tuberosum PGSC0003DMG400013402 I
PGSC0003DMG400014204 Solanum tuberosum PGSC0003DMG400014204 I
PGSC0003DMG400017231 Solanum tuberosum PGSC0003DMG400017231 I
PGSC0003DMG400026046 Solanum tuberosum PGSC0003DMG400026046 I
PGSC0003DMG400026049 Solanum tuberosum PGSC0003DMG400026049 I
PGSC0003DMG400026260 Solanum tuberosum PGSC0003DMG400026260 I
PGSC0003DMG400036566 Solanum tuberosum PGSC0003DMG400036566 I
PGSC0003DMG400041045 Solanum tuberosum PGSC0003DMG400041045 I
POPTR_0001s15390 Populus trichocarpa POPTR_0001s15390 I
POPTR_0003s07910 Populus trichocarpa POPTR_0003s07910 I
PRUPE_ppa009707mg Prunus persica PRUPE_ppa009707mg I
PRUPE_ppa020417mg Prunus persica PRUPE_ppa020417mg I
PRUPE_ppa023698mg Prunus persica PRUPE_ppa023698mg I
PRUPE_ppa025748mg Prunus persica PRUPE_ppa025748mg I
Sb01g000352 Sorghum bicolor Sb01g000352 I
Sb02g012630 Sorghum bicolor Sb02g012630 I
Sb04g033105 Sorghum bicolor Sb04g033105 I
ERF1 Arabidopsis lyrata scaffold_302806.1 I
scaffold_600764.1 Arabidopsis lyrata scaffold_600764.1 I
Solyc01g090310.2 Solanum lycopersicum Solyc01g090310.2 I
Solyc01g090370.1 Solanum lycopersicum Solyc01g090370.1 I
Solyc03g005520.1 Solanum lycopersicum Solyc03g005520.1 I
Solyc03g093530.1 Solanum lycopersicum Solyc03g093530.1 I
Solyc08g007230.1 Solanum lycopersicum Solyc08g007230.1 I
Solyc08g078170.1 Solanum lycopersicum Solyc08g078170.1 I
Solyc09g066340.1 Solanum lycopersicum Solyc09g066340.1 I
Solyc09g066360.1 Solanum lycopersicum Solyc09g066360.1 I
Solyc09g089930.1 Solanum lycopersicum Solyc09g089930.1 I
Solyc11g011740.1 Solanum lycopersicum Solyc11g011740.1 I
Solyc11g011750.1 Solanum lycopersicum Solyc11g011750.1 I
TCM_005704 Theobroma cacao TCM_005704 I
TCM_014850 Theobroma cacao TCM_014850 I
TCM_015898 Theobroma cacao TCM_015898 I
Traes_2AL_0B28B6DBE Triticum aestivum Traes_2AL_0B28B6DBE I
Traes_4AL_1A0E673DC Triticum aestivum Traes_4AL_1A0E673DC I
Traes_4AL_5E86DF14B Triticum aestivum Traes_4AL_5E86DF14B I
Traes_4BL_39AE2989D Triticum aestivum Traes_4BL_39AE2989D I
Traes_5BL_4E044468C Triticum aestivum Traes_5BL_4E044468C I
Traes_5BL_FBC7AF288 Triticum aestivum Traes_5BL_FBC7AF288 I
Traes_5DL_53D8DF9CD Triticum aestivum Traes_5DL_53D8DF9CD I
VIT_02s0234g00130 Vitis vinifera VIT_02s0234g00130 I
VIT_15s0021g01590 Vitis vinifera VIT_15s0021g01590 I
VIT_15s0021g01600 Vitis vinifera VIT_15s0021g01600 I
VIT_15s0021g01610 Vitis vinifera VIT_15s0021g01610 I
VIT_15s0021g01630 Vitis vinifera VIT_15s0021g01630 I
Ca_02325 Cicer arietinum Ca_02325 I
Ca_12775 Cicer arietinum Ca_12775 I
Ca_17212 Cicer arietinum Ca_17212 I
Cla003706 Citrullus lanatus Cla003706 I
Cla005705 Citrullus lanatus Cla005705 I
Pm017697 Prunus mume Pm017697 I
Pm017698 Prunus mume Pm017698 I
Pm017700 Prunus mume Pm017700 I
Pm023376 Prunus mume Pm023376 I
28192.m000255 Ricinus communis 28192.m000255 I
30174.m008759 Ricinus communis 30174.m008759 I
cassava34729.m1 Manihot esculenta cassava34729.m1 I
cassava4871.m1 Manihot esculenta cassava4871.m1 I
Cucsa.129630 Cucumis sativus Cucsa.129630 I
Cucsa.321160 Cucumis sativus Cucsa.321160 I
e_gw1.53.114.1 Physcomitrella patens e_gw1.53.114.1 I
e_gw1.72.116.1 Physcomitrella patens e_gw1.72.116.1 I
mgf017485m Mimulus guttatus mgf017485m I
mgf020623m Mimulus guttatus mgf020623m I
mgf021067m Mimulus guttatus mgf021067m I
mgf021081m Mimulus guttatus mgf021081m I
mgf021756m Mimulus guttatus mgf021756m I
Aquca_067_00004 Aquilegia coerulea Aquca_067_00004 I
Bostr.13129s0205 Boechera stricta Bostr.13129s0205 I
Bostr.14419s0016 Boechera stricta Bostr.14419s0016 I
Bostr.19424s0319 Boechera stricta Bostr.19424s0319 I
Bostr.24513s0101 Boechera stricta Bostr.24513s0101 I
Bostr.25993s0288 Boechera stricta Bostr.25993s0288 I
Bostr.26833s0077 Boechera stricta Bostr.26833s0077 I
Bostr.30275s0207 Boechera stricta Bostr.30275s0207 I
Cagra.0542s0054 Capsella grandiflora Cagra.0542s0054 I
Cagra.2925s0026 Capsella grandiflora Cagra.2925s0026 I
Cagra.3356s0041 Capsella grandiflora Cagra.3356s0041 I
Cagra.3675s0007 Capsella grandiflora Cagra.3675s0007 I
Cagra.6952s0002 Capsella grandiflora Cagra.6952s0002 I
Cagra.8559s0001 Capsella grandiflora Cagra.8559s0001 I
Carubv10001989m.g Capsella rubella Carubv10001989m.g I
Carubv10005497m.g Capsella rubella Carubv10005497m.g I
Carubv10014553m.g Capsella rubella Carubv10014553m.g I
Carubv10025229m.g Capsella rubella Carubv10025229m.g I
Carubv10027108m.g Capsella rubella Carubv10027108m.g I
Carubv10027835m.g Capsella rubella Carubv10027835m.g I
Ciclev10021652m.g Citrus clementina Ciclev10021652m.g I
Ciclev10023352m.g Citrus clementina Ciclev10023352m.g I
gene04916-v1.0-hybrid Fragaria vesca gene04916-v1.0-hybrid I
gene10841-v1.0-hybrid Fragaria vesca gene10841-v1.0-hybrid I
Gorai.004G195000 Gossypium raimondii Gorai.004G195000 I
Gorai.004G195100 Gossypium raimondii Gorai.004G195100 I
Gorai.004G195200 Gossypium raimondii Gorai.004G195200 I
Gorai.004G220800 Gossypium raimondii Gorai.004G220800 I
Gorai.006G214100 Gossypium raimondii Gorai.006G214100 I
Gorai.007G086100 Gossypium raimondii Gorai.007G086100 I
Gorai.008G108400 Gossypium raimondii Gorai.008G108400 I
Gorai.008G108600 Gossypium raimondii Gorai.008G108600 I
Gorai.008G232500 Gossypium raimondii Gorai.008G232500 I
Lus10004368.g Linum usitatissimum Lus10004368.g I
Lus10006579.g Linum usitatissimum Lus10006579.g I
Lus10013959.g Linum usitatissimum Lus10013959.g I
Lus10014655.g Linum usitatissimum Lus10014655.g I
Lus10032498.g Linum usitatissimum Lus10032498.g I
Lus10042995.g Linum usitatissimum Lus10042995.g I
MDP0000122665 Malus domestica MDP0000122665 I
MDP0000135205 Malus domestica MDP0000135205 I
MDP0000299277 Malus domestica MDP0000299277 I
MDP0000665685 Malus domestica MDP0000665685 I
MDP0000787281 Malus domestica MDP0000787281 I
orange1.1g030002m.g Citrus sinensis orange1.1g030002m.g I
orange1.1g043029m.g Citrus sinensis orange1.1g043029m.g I
orange1.1g044938m.g Citrus sinensis orange1.1g044938m.g I
Pavir.Aa01184 Panicum virgatum Pavir.Aa01184 I
Pavir.Ab02556 Panicum virgatum Pavir.Ab02556 I
SapurV1A.0124s0180 Salix purpurea SapurV1A.0124s0180 I
SapurV1A.1153s0050 Salix purpurea SapurV1A.1153s0050 I
Thhalv10001003m.g Eutrema salsugineum Thhalv10001003m.g I
Thhalv10005285m.g Eutrema salsugineum Thhalv10005285m.g I
Thhalv10014666m.g Eutrema salsugineum Thhalv10014666m.g I
Thhalv10017149m.g Eutrema salsugineum Thhalv10017149m.g I
Thhalv10022200m.g Eutrema salsugineum Thhalv10022200m.g I
Thhalv10022374m.g Eutrema salsugineum Thhalv10022374m.g I
PK23186.1 Cannabis sativa PK23186.1 I
PK29475.1 Cannabis sativa PK29475.1 I
chr3.CM0080.270.nc Lotus japonicus chr3.CM0080.270.nc I
chr5.CM0494.320.nc Lotus japonicus chr5.CM0494.320.nc I
chr5.CM0494.330.nc Lotus japonicus chr5.CM0494.330.nc I
LjSGA_146586.1 Lotus japonicus LjSGA_146586.1 I