CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SERLA73DRAFT_175892
(
Serpula lacrymans
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
SERLA73DRAFT_175892
T332518_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
fmf-1
M02491_2.00
Neurospora crassa
TCTTTGTY
RACAAAGA
PBM
Weirauch et al.(2014)
pTH8941
0.450
0.304
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGO04121
Sox
82
151
IPRPPNAFILFRSSFIKSQHVSTEVETNHSTLSKIIGLTWQNMPHEERQIWHAKAKAALEEHRRKWPQYA
Links
Other
Sox
family TFs
Other
Serpula lacrymans
TFs
339 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M404DRAFT_159338
Pisolithus tinctorius
M404DRAFT_159338
I
0.000
M407DRAFT_17636
Tulasnella calospora
M407DRAFT_17636
I
0.000
PISMIDRAFT_36586
Pisolithus microcarpus
PISMIDRAFT_36586
I
0.000
LLOJ001028
Lutzomyia longipalpis
LLOJ001028
I
0.000
DACRYDRAFT_118397
Dacryopinax sp
DACRYDRAFT_118397
N
0.000
PAXINDRAFT_180477
Paxillus involutus
PAXINDRAFT_180477
N
0.000
PAXRUDRAFT_824795
Paxillus rubicundulus
PAXRUDRAFT_824795
N
0.000
PIIN_02847
Piriformospora indica
PIIN_02847
N
0.000