CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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lsd1
(
Schizosaccharomyces pombe
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
SPBC146.09c
T332706_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPBC146.09c.1
Sox
862
921
LADQDKQRVTGDPEARATKNEIRAKLGKTWRALDSLGKQPWVDEINARRANYSTRLEEYQ
Links
Other
Sox
family TFs
Other
Schizosaccharomyces pombe
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_5g017500
Medicago truncatula
MTR_5g017500
N
POPTR_0002s24480
Populus trichocarpa
POPTR_0002s24480
N
30204.m001751
Ricinus communis
30204.m001751
N
cassava28795.m1
Manihot esculenta
cassava28795.m1
N
SapurV1A.0135s0330
Salix purpurea
SapurV1A.0135s0330
N
PK06605.1
Cannabis sativa
PK06605.1
N