CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thaps10374
(
Thalassiosira pseudonana
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
Thaps10374
T332903_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thaps10374
Sox
81
136
RKKRQDHVNHGIITFHDLTKTISHNWNTADLETRMYCKDLAEMELTRYHRDLSAYR
Links
Other
Sox
family TFs
Other
Thalassiosira pseudonana
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HMG20A
Callithrix jacchus
ENSCJAG00000011131
I
0.420
HMG20B
Pan troglodytes
ENSPTRG00000010268
I
0.432
Thaps1764
Thalassiosira pseudonana
Thaps1764
N
0.493
Thaps1871
Thalassiosira pseudonana
Thaps1871
N
0.578