CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thaps12024
(
Thalassiosira pseudonana
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
Thaps12024
T332910_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thaps12024
Sox
23
48
PKRCLSAYNLYYRFKRSKILDACAAG
Thaps12024
Sox
99
156
RDTSKRSHTKTHGAMTFVAMGKIMSTMWKEQDDEIKQIFRDLAEQGRKEYQKLLKDLD
Links
Other
Sox
family TFs
Other
Thalassiosira pseudonana
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMAG_10934
Allomyces macrogynus
AMAG_10934
I
0.000
AMAG_11531
Allomyces macrogynus
AMAG_11531
I
0.000