TriadG23407 (Trichoplax adhaerens)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 TriadG23407 T333021_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.560 0.681
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TriadP23407 Sox 16 84

Links

Other Sox family TFs
Other Trichoplax adhaerens TFs

175 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NAC098 Arabidopsis thaliana AT5G53950 D
NAC100 Arabidopsis thaliana AT5G61430 D
e_gw1.288.15.1 Physcomitrella patens e_gw1.288.15.1 D
e_gw1.327.11.1 Physcomitrella patens e_gw1.327.11.1 D
CUC2 Arabidopsis lyrata Al_scaffold_0008_1815 I
AMTR_s00010p00266320 Amborella trichopoda AMTR_s00010p00266320 I
AMTR_s00022p00160350 Amborella trichopoda AMTR_s00022p00160350 I
AMTR_s00058p00136280 Amborella trichopoda AMTR_s00058p00136280 I
BGIOSGA001578 Oryza indica BGIOSGA001578 I
BGIOSGA002597 Oryza indica BGIOSGA002597 I
BGIOSGA008492 Oryza indica BGIOSGA008492 I
BGIOSGA014034 Oryza indica BGIOSGA014034 I
BGIOSGA016546 Oryza indica BGIOSGA016546 I
BGIOSGA022861 Oryza indica BGIOSGA022861 I
BGIOSGA026695 Oryza indica BGIOSGA026695 I
BGIOSGA029508 Oryza indica BGIOSGA029508 I
Bo2g043280 Brassica oleracea Bo2g043280 I
Bo2g089890 Brassica oleracea Bo2g089890 I
Bo5g002810 Brassica oleracea Bo5g002810 I
Bo6g120460 Brassica oleracea Bo6g120460 I
Bo9g113820 Brassica oleracea Bo9g113820 I
Bra008259 Brassica rapa Bra008259 I
Bra015750 Brassica rapa Bra015750 I
Bra022685 Brassica rapa Bra022685 I
BRADI3G46900 Brachypodium distachyon BRADI3G46900 I
BRADI4G37327 Brachypodium distachyon BRADI4G37327 I
BRADI5G12407 Brachypodium distachyon BRADI5G12407 I
F775_20638 Aegilops tauschii F775_20638 I
F775_30297 Aegilops tauschii F775_30297 I
GLYMA05G00930 Glycine max GLYMA05G00930 I
GLYMA09G37050 Glycine max GLYMA09G37050 I
GLYMA13G05540 Glycine max GLYMA13G05540 I
GLYMA18G49620 Glycine max GLYMA18G49620 I
GRMZM2G003715 Zea mays GRMZM2G003715 I
GRMZM2G009892 Zea mays GRMZM2G009892 I
GRMZM2G139700 Zea mays GRMZM2G139700 I
GRMZM2G386163 Zea mays GRMZM2G386163 I
GSMUA_Achr10G22350_001 Musa acuminata GSMUA_Achr10G22350_001 I
GSMUA_Achr7G23250_001 Musa acuminata GSMUA_Achr7G23250_001 I
GSMUA_Achr9G10040_001 Musa acuminata GSMUA_Achr9G10040_001 I
LPERR01G00270 Leersia perrieri LPERR01G00270 I
LPERR04G11740 Leersia perrieri LPERR04G11740 I
LPERR06G12840 Leersia perrieri LPERR06G12840 I
LPERR08G17020 Leersia perrieri LPERR08G17020 I
LPERR09G11330 Leersia perrieri LPERR09G11330 I
MLOC_13932 Hordeum vulgare MLOC_13932 I
MLOC_65286 Hordeum vulgare MLOC_65286 I
MTR_1g008740 Medicago truncatula MTR_1g008740 I
MTR_2g078700 Medicago truncatula MTR_2g078700 I
MTR_3g070030 Medicago truncatula MTR_3g070030 I
OB01G10300 Oryza brachyantha OB01G10300 I
OB04G22290 Oryza brachyantha OB04G22290 I
OB06G22100 Oryza brachyantha OB06G22100 I
OBART01G00360 Oryza barthii OBART01G00360 I
OBART01G16620 Oryza barthii OBART01G16620 I
OBART02G21850 Oryza barthii OBART02G21850 I
OBART04G14970 Oryza barthii OBART04G14970 I
OBART06G13940 Oryza barthii OBART06G13940 I
OBART09G15220 Oryza barthii OBART09G15220 I
OGLUM01G00350 Oryza glumaepatula OGLUM01G00350 I
OGLUM01G19440 Oryza glumaepatula OGLUM01G19440 I
OGLUM02G22030 Oryza glumaepatula OGLUM02G22030 I
OGLUM04G14830 Oryza glumaepatula OGLUM04G14830 I
OGLUM04G30580 Oryza glumaepatula OGLUM04G30580 I
OGLUM06G14810 Oryza glumaepatula OGLUM06G14810 I
OGLUM08G21360 Oryza glumaepatula OGLUM08G21360 I
OGLUM09G15820 Oryza glumaepatula OGLUM09G15820 I
OLONG_008218 Oryza longistaminata OLONG_008218 I
OLONG_009674 Oryza longistaminata OLONG_009674 I
OLONG_019251 Oryza longistaminata OLONG_019251 I
OLONG_022415 Oryza longistaminata OLONG_022415 I
OLONG_023103 Oryza longistaminata OLONG_023103 I
OMERI01G15210 Oryza meridionalis OMERI01G15210 I
OMERI01G15230 Oryza meridionalis OMERI01G15230 I
OMERI02G21390 Oryza meridionalis OMERI02G21390 I
OMERI07G04410 Oryza meridionalis OMERI07G04410 I
ONIVA01G00280 Oryza nivara ONIVA01G00280 I
ONIVA01G18370 Oryza nivara ONIVA01G18370 I
ONIVA02G24080 Oryza nivara ONIVA02G24080 I
ONIVA03G33370 Oryza nivara ONIVA03G33370 I
ONIVA04G13100 Oryza nivara ONIVA04G13100 I
ONIVA04G29890 Oryza nivara ONIVA04G29890 I
ONIVA08G22710 Oryza nivara ONIVA08G22710 I
ONIVA09G15800 Oryza nivara ONIVA09G15800 I
OPUNC01G00320 Oryza punctata OPUNC01G00320 I
OPUNC02G19580 Oryza punctata OPUNC02G19580 I
OPUNC04G12870 Oryza punctata OPUNC04G12870 I
OPUNC06G13130 Oryza punctata OPUNC06G13130 I
OPUNC08G18240 Oryza punctata OPUNC08G18240 I
OPUNC09G13640 Oryza punctata OPUNC09G13640 I
ORGLA04G0119700 Oryza glaberrima ORGLA04G0119700 I
ORGLA04G0270600 Oryza glaberrima ORGLA04G0270600 I
ORGLA06G0124600 Oryza glaberrima ORGLA06G0124600 I
ORGLA08G0177600 Oryza glaberrima ORGLA08G0177600 I
ORGLA09G0117400 Oryza glaberrima ORGLA09G0117400 I
ORGLA12G0187900 Oryza glaberrima ORGLA12G0187900 I
ORUFI01G00320 Oryza rufipogon ORUFI01G00320 I
ORUFI01G18470 Oryza rufipogon ORUFI01G18470 I
ORUFI02G22930 Oryza rufipogon ORUFI02G22930 I
ORUFI04G16370 Oryza rufipogon ORUFI04G16370 I
ORUFI04G32410 Oryza rufipogon ORUFI04G32410 I
ORUFI06G14810 Oryza rufipogon ORUFI06G14810 I
ORUFI08G22550 Oryza rufipogon ORUFI08G22550 I
ORUFI09G16430 Oryza rufipogon ORUFI09G16430 I
OS01G0104500 Oryza sativa OS01G0104500 I
OS01G0393100 Oryza sativa OS01G0393100 I
OS02G0579000 Oryza sativa OS02G0579000 I
OS04G0460600 Oryza sativa OS04G0460600 I
OS04G0691300 Oryza sativa OS04G0691300 I
OS06G0344900 Oryza sativa OS06G0344900 I
OS08G0511200 Oryza sativa OS08G0511200 I
OS09G0497900 Oryza sativa OS09G0497900 I
PGSC0003DMG400009920 Solanum tuberosum PGSC0003DMG400009920 I
PGSC0003DMG400029593 Solanum tuberosum PGSC0003DMG400029593 I
POPTR_0002s00730 Populus trichocarpa POPTR_0002s00730 I
POPTR_0005s27720 Populus trichocarpa POPTR_0005s27720 I
POPTR_0011s11600 Populus trichocarpa POPTR_0011s11600 I
PRUPE_ppa022384mg Prunus persica PRUPE_ppa022384mg I
PRUPE_ppa026810mg Prunus persica PRUPE_ppa026810mg I
Sb02g028870 Sorghum bicolor Sb02g028870 I
Sb06g019010 Sorghum bicolor Sb06g019010 I
SELMODRAFT_71307 Selaginella moellendorffii SELMODRAFT_71307 I
SELMODRAFT_86855 Selaginella moellendorffii SELMODRAFT_86855 I
Si010553m.g Setaria italica Si010553m.g I
Si030187m.g Setaria italica Si030187m.g I
Solyc07g062840.2 Solanum lycopersicum Solyc07g062840.2 I
Solyc08g074300.2 Solanum lycopersicum Solyc08g074300.2 I
TCM_031619 Theobroma cacao TCM_031619 I
TCM_034835 Theobroma cacao TCM_034835 I
TCM_035160 Theobroma cacao TCM_035160 I
Traes_7AL_74CC91D39 Triticum aestivum Traes_7AL_74CC91D39 I
Traes_7DL_BDD45DB24 Triticum aestivum Traes_7DL_BDD45DB24 I
TRIUR3_29250 Triticum urartu TRIUR3_29250 I
CUC3 Vitis vinifera VIT_18s0122g00800 I
VIT_19s0014g02200 Vitis vinifera VIT_19s0014g02200 I
Ca_22370 Cicer arietinum Ca_22370 I
Ca_22532 Cicer arietinum Ca_22532 I
Cla010484 Citrullus lanatus Cla010484 I
Cla017258 Citrullus lanatus Cla017258 I
Cla023717 Citrullus lanatus Cla023717 I
Pm011397 Prunus mume Pm011397 I
Pm028711 Prunus mume Pm028711 I
27950.m000105 Ricinus communis 27950.m000105 I
28649.m000212 Ricinus communis 28649.m000212 I
30170.m014236 Ricinus communis 30170.m014236 I
cassava1757.valid.m1 Manihot esculenta cassava1757.valid.m1 I
cassava1758.valid.m1 Manihot esculenta cassava1758.valid.m1 I
cassava21580.m1 Manihot esculenta cassava21580.m1 I
cassava27052.m1 Manihot esculenta cassava27052.m1 I
cassava361.valid.m1 Manihot esculenta cassava361.valid.m1 I
cassava44869.m1 Manihot esculenta cassava44869.m1 I
Cucsa.122890 Cucumis sativus Cucsa.122890 I
e_gw1.227.43.1 Physcomitrella patens e_gw1.227.43.1 I
e_gw1.259.32.1 Physcomitrella patens e_gw1.259.32.1 I
e_gw1.5.134.1 Physcomitrella patens e_gw1.5.134.1 I
estExt_gwp_gw1.C_460173 Physcomitrella patens estExt_gwp_gw1.C_460173 I
fgenesh1_pg.scaffold_182000024 Physcomitrella patens fgenesh1_pg.scaffold_182000024 I
mgf002183m Mimulus guttatus mgf002183m I
mgf015836m Mimulus guttatus mgf015836m I
mgf023466m Mimulus guttatus mgf023466m I
Aquca_002_00662 Aquilegia coerulea Aquca_002_00662 I
Aquca_009_00966 Aquilegia coerulea Aquca_009_00966 I
Aquca_033_00035 Aquilegia coerulea Aquca_033_00035 I
Bostr.0556s0555 Boechera stricta Bostr.0556s0555 I
Bostr.25375s0002 Boechera stricta Bostr.25375s0002 I
Bostr.26833s0095 Boechera stricta Bostr.26833s0095 I
Bostr.26833s0880 Boechera stricta Bostr.26833s0880 I
Cagra.1968s0045 Capsella grandiflora Cagra.1968s0045 I
Cagra.27691s0001 Capsella grandiflora Cagra.27691s0001 I
Cagra.4622s0005 Capsella grandiflora Cagra.4622s0005 I
Carubv10009049m.g Capsella rubella Carubv10009049m.g I
Carubv10009451m.g Capsella rubella Carubv10009451m.g I
Carubv10028330m.g Capsella rubella Carubv10028330m.g I
Ciclev10001403m.g Citrus clementina Ciclev10001403m.g I
Ciclev10008619m.g Citrus clementina Ciclev10008619m.g I
Ciclev10012093m.g Citrus clementina Ciclev10012093m.g I
Eucgr.B00529 Eucalyptus grandis Eucgr.B00529 I
evm.TU.supercontig_131.88 Carica papaya evm.TU.supercontig_131.88 I
evm.TU.supercontig_286.12 Carica papaya evm.TU.supercontig_286.12 I
gene00971-v1.0-hybrid Fragaria vesca gene00971-v1.0-hybrid I
gene04424-v1.0-hybrid Fragaria vesca gene04424-v1.0-hybrid I
Gorai.002G067300 Gossypium raimondii Gorai.002G067300 I
Gorai.007G079900 Gossypium raimondii Gorai.007G079900 I
Gorai.007G323900 Gossypium raimondii Gorai.007G323900 I
Gorai.009G186000 Gossypium raimondii Gorai.009G186000 I
Gorai.010G051900 Gossypium raimondii Gorai.010G051900 I
Gorai.013G171300 Gossypium raimondii Gorai.013G171300 I
Lus10005537.g Linum usitatissimum Lus10005537.g I
Lus10041924.g Linum usitatissimum Lus10041924.g I
MDP0000129335 Malus domestica MDP0000129335 I
MDP0000135860 Malus domestica MDP0000135860 I
MDP0000232050 Malus domestica MDP0000232050 I
MDP0000310981 Malus domestica MDP0000310981 I
orange1.1g016283m.g Citrus sinensis orange1.1g016283m.g I
orange1.1g018950m.g Citrus sinensis orange1.1g018950m.g I
orange1.1g047710m.g Citrus sinensis orange1.1g047710m.g I
Pavir.Gb01850 Panicum virgatum Pavir.Gb01850 I
Pavir.J02772 Panicum virgatum Pavir.J02772 I
Pavir.J04049 Panicum virgatum Pavir.J04049 I
Pavir.J23199 Panicum virgatum Pavir.J23199 I
SapurV1A.0016s0340 Salix purpurea SapurV1A.0016s0340 I
SapurV1A.0266s0070 Salix purpurea SapurV1A.0266s0070 I
SapurV1A.1325s0010 Salix purpurea SapurV1A.1325s0010 I
SapurV1A.2059s0010 Salix purpurea SapurV1A.2059s0010 I
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I
Thhalv10013863m.g Eutrema salsugineum Thhalv10013863m.g I
Thhalv10019493m.g Eutrema salsugineum Thhalv10019493m.g I
chr4.CM0087.800.nd Lotus japonicus chr4.CM0087.800.nd I
F775_26920 Aegilops tauschii F775_26920 N
F775_32832 Aegilops tauschii F775_32832 N
GRMZM5G898290 Zea mays GRMZM5G898290 N
LPERR02G17680 Leersia perrieri LPERR02G17680 N
LPERR02G20100 Leersia perrieri LPERR02G20100 N
LPERR06G20430 Leersia perrieri LPERR06G20430 N
MLOC_53744 Hordeum vulgare MLOC_53744 N
MLOC_65714 Hordeum vulgare MLOC_65714 N
OB02G29280 Oryza brachyantha OB02G29280 N
OBART11G01600 Oryza barthii OBART11G01600 N
OLONG_010248 Oryza longistaminata OLONG_010248 N
OMERI04G21180 Oryza meridionalis OMERI04G21180 N
OMERI12G00500 Oryza meridionalis OMERI12G00500 N
ORGLA04G0226100 Oryza glaberrima ORGLA04G0226100 N
Sb04g023990 Sorghum bicolor Sb04g023990 N
Sb09g008000 Sorghum bicolor Sb09g008000 N
Si006975m.g Setaria italica Si006975m.g N
Si017567m.g Setaria italica Si017567m.g N
Traes_2AL_57BF37A86 Triticum aestivum Traes_2AL_57BF37A86 N
Traes_2BL_6AEE8AC28 Triticum aestivum Traes_2BL_6AEE8AC28 N
Traes_2DL_DF7B995C9 Triticum aestivum Traes_2DL_DF7B995C9 N
Traes_7AL_BE3253C8F Triticum aestivum Traes_7AL_BE3253C8F N
TRIUR3_03895 Triticum urartu TRIUR3_03895 N
TRIUR3_09915 Triticum urartu TRIUR3_09915 N
mgf018054m Mimulus guttatus mgf018054m N
Pavir.Db00380 Panicum virgatum Pavir.Db00380 N
Pavir.J24971 Panicum virgatum Pavir.J24971 N