CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_04733
(
Verticillium alfalfae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
VDBG_04733
T333211_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEY18624
Sox
213
273
PKRPTTVYNLFFKARWASGDFSGSVTEATRTIAEEYKQLSEEQRQVYEDLATADFERYARG
Links
Other
Sox
family TFs
Other
Verticillium alfalfae
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400030831
Solanum tuberosum
PGSC0003DMG400030831
N
TCM_032355
Theobroma cacao
TCM_032355
N
Cucsa.045610
Cucumis sativus
Cucsa.045610
N
Ciclev10015528m.g
Citrus clementina
Ciclev10015528m.g
N
Gorai.002G037800
Gossypium raimondii
Gorai.002G037800
N
Gorai.011G228000
Gossypium raimondii
Gorai.011G228000
N
Gorai.013G021200
Gossypium raimondii
Gorai.013G021200
N
orange1.1g036050m.g
Citrus sinensis
orange1.1g036050m.g
N