CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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YALI0_C24398g
(
Yarrowia lipolytica
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
YALI0_C24398g
T333314_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAG82546
Sox
108
181
PKKPMTVFLAFSTDQRAVIRAERKAKGLSALASSQMAAEVTQMWADLPEERKDQYRQQYLERLAEYRTNKAAYL
Links
Other
Sox
family TFs
Other
Yarrowia lipolytica
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EIL2
Arabidopsis thaliana
AT5G21120
N
Bo2g023430
Brassica oleracea
Bo2g023430
N
Bo9g150010
Brassica oleracea
Bo9g150010
N
EIL2
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_6001799
N
Bostr.26527s0101
Boechera stricta
Bostr.26527s0101
N
Cagra.5864s0003
Capsella grandiflora
Cagra.5864s0003
N
Carubv10000708m.g
Capsella rubella
Carubv10000708m.g
N
Thhalv10013166m.g
Eutrema salsugineum
Thhalv10013166m.g
N