CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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YQE_03562
(
Dendroctonus ponderosae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
YQE_03562
T333335_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENN80001
Sox
16
72
ARSKRRPLKRKSTRGIPVTEIAKTAGKLWKMMSERDRSPYINMARKAPIRRRRKRDG
Links
Other
Sox
family TFs
Other
Dendroctonus ponderosae
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00044p00144500
Amborella trichopoda
AMTR_s00044p00144500
N
GRMZM2G096759
Zea mays
GRMZM2G096759
N
GRMZM2G130784
Zea mays
GRMZM2G130784
N
GRMZM5G884544
Zea mays
GRMZM5G884544
N
TCM_000914
Theobroma cacao
TCM_000914
N
Gorai.007G058000
Gossypium raimondii
Gorai.007G058000
N
Pavir.Da01516
Panicum virgatum
Pavir.Da01516
N