fgenesh2_pg.9_#_75 (Fragilariopsis cylindrus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgenesh2_pg.9_#_75 T334136_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.9_#_75 Sox 34 65
fgenesh2_pg.9_#_75 Sox 76 132

Links

Other Sox family TFs
Other Fragilariopsis cylindrus TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_00001 Aegilops tauschii F775_00001 N 0.000
F775_11444 Aegilops tauschii F775_11444 N 0.000
MLOC_60965 Hordeum vulgare MLOC_60965 N 0.000
Traes_1BL_A75EDBFD9 Triticum aestivum Traes_1BL_A75EDBFD9 N 0.000
Traes_2BS_3CA0FC03E Triticum aestivum Traes_2BS_3CA0FC03E N 0.000
Traes_2DL_01DEC201E Triticum aestivum Traes_2DL_01DEC201E N 0.000
Traes_3AL_29AD9D378 Triticum aestivum Traes_3AL_29AD9D378 N 0.000
Traes_7AS_DE61FE07F Triticum aestivum Traes_7AS_DE61FE07F N 0.000
Traes_7DS_EB10DBA07 Triticum aestivum Traes_7DS_EB10DBA07 N 0.000
TRIUR3_06404 Triticum urartu TRIUR3_06404 N 0.000
TRIUR3_13794 Triticum urartu TRIUR3_13794 N 0.000
TRIUR3_17083 Triticum urartu TRIUR3_17083 N 0.000