CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
gw1.11.235.1
(
Sporobolomyces roseus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
gw1.11.235.1
T334223_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.11.235.1
Sox
16
62
PKRPASAYIEYQNHVRDEFRERHSDLPYAEVLKKIGESWASMNEQQK
Links
Other
Sox
family TFs
Other
Sporobolomyces roseus
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMAG_02504
Allomyces macrogynus
AMAG_02504
I
0.419
SERLA73DRAFT_131740
Serpula lacrymans
SERLA73DRAFT_131740
I
0.463
RHTO_02497
Rhodosporidium toruloides
RHTO_02497
N
0.448
OFLC_0001223401
Onchocerca flexuosa
OFLC_0001223401
N
0.461