Sakowv30017721m.g (Saccoglossus kowalevskii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Sakowv30017721m.g T334344_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
23914290_peptide Sox 93 161
23914291_peptide Sox 67 135

Links

Other Sox family TFs
Other Saccoglossus kowalevskii TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00048p00216350 Amborella trichopoda AMTR_s00048p00216350 I 0.000
BGIOSGA022056 Oryza indica BGIOSGA022056 I 0.000
BRADI1G50597 Brachypodium distachyon BRADI1G50597 I 0.000
F775_19681 Aegilops tauschii F775_19681 I 0.000
GRMZM2G067743 Zea mays GRMZM2G067743 I 0.000
GRMZM2G098594 Zea mays GRMZM2G098594 I 0.000
GRMZM5G893117 Zea mays GRMZM5G893117 I 0.000
GSMUA_Achr11G21590_001 Musa acuminata GSMUA_Achr11G21590_001 I 0.000
GSMUA_Achr5G20170_001 Musa acuminata GSMUA_Achr5G20170_001 I 0.000
LPERR06G01000 Leersia perrieri LPERR06G01000 I 0.000
OB03G39940 Oryza brachyantha OB03G39940 I 0.000
OB06G11200 Oryza brachyantha OB06G11200 I 0.000
OBART06G01070 Oryza barthii OBART06G01070 I 0.000
OGLUM06G01060 Oryza glumaepatula OGLUM06G01060 I 0.000
OMERI06G01060 Oryza meridionalis OMERI06G01060 I 0.000
ONIVA06G01450 Oryza nivara ONIVA06G01450 I 0.000
OPUNC06G01050 Oryza punctata OPUNC06G01050 I 0.000
ORGLA06G0010200 Oryza glaberrima ORGLA06G0010200 I 0.000
ORUFI06G01080 Oryza rufipogon ORUFI06G01080 I 0.000
Sb10g001350 Sorghum bicolor Sb10g001350 I 0.000
Si008818m.g Setaria italica Si008818m.g I 0.000
Traes_6BL_7462E6F9B Triticum aestivum Traes_6BL_7462E6F9B I 0.000
TRIUR3_01357 Triticum urartu TRIUR3_01357 I 0.000
VIT_02s0025g04910 Vitis vinifera VIT_02s0025g04910 I 0.000
29700.m000761 Ricinus communis 29700.m000761 I 0.000
30190.m011066 Ricinus communis 30190.m011066 I 0.000
cassava30116.valid.m1 Manihot esculenta cassava30116.valid.m1 I 0.000
Aquca_013_00537 Aquilegia coerulea Aquca_013_00537 I 0.000
Ciclev10022033m.g Citrus clementina Ciclev10022033m.g I 0.000
orange1.1g028751m.g Citrus sinensis orange1.1g028751m.g I 0.000
Pavir.Aa00919 Panicum virgatum Pavir.Aa00919 I 0.000
Pavir.Da02366 Panicum virgatum Pavir.Da02366 I 0.000
Pavir.Db02421 Panicum virgatum Pavir.Db02421 I 0.000
SapurV1A.0326s0130 Salix purpurea SapurV1A.0326s0130 I 0.000
AtGRF2 Arabidopsis lyrata Al_scaffold_0007_269 N 0.000
AMTR_s00018p00250840 Amborella trichopoda AMTR_s00018p00250840 N 0.000
GRF1 Arabidopsis thaliana AT2G22840 N 0.000
GRF8 Arabidopsis thaliana AT4G24150 N 0.000
GRF2 Arabidopsis thaliana AT4G37740 N 0.000
BGIOSGA013499 Oryza indica BGIOSGA013499 N 0.000
BGIOSGA035433 Oryza indica BGIOSGA035433 N 0.000
BGIOSGA037400 Oryza indica BGIOSGA037400 N 0.000
Bo1g037590 Brassica oleracea Bo1g037590 N 0.000
Bo2g044580 Brassica oleracea Bo2g044580 N 0.000
Bo3g042310 Brassica oleracea Bo3g042310 N 0.000
Bo4g122960 Brassica oleracea Bo4g122960 N 0.000
Bo7g109350 Brassica oleracea Bo7g109350 N 0.000
Bo7g118730 Brassica oleracea Bo7g118730 N 0.000
Bra000575 Brassica rapa Bra000575 N 0.000
Bra005268 Brassica rapa Bra005268 N 0.000
Bra013767 Brassica rapa Bra013767 N 0.000
Bra017851 Brassica rapa Bra017851 N 0.000
Bra019244 Brassica rapa Bra019244 N 0.000
Bra022667 Brassica rapa Bra022667 N 0.000
BRADI1G09900 Brachypodium distachyon BRADI1G09900 N 0.000
BRADI4G16450 Brachypodium distachyon BRADI4G16450 N 0.000
F775_27966 Aegilops tauschii F775_27966 N 0.000
AtGRF1 Arabidopsis lyrata fgenesh2_kg.4__207__AT2G22840.1 N 0.000
GLYMA03G35010 Glycine max GLYMA03G35010 N 0.000
GLYMA04G40880 Glycine max GLYMA04G40880 N 0.000
GLYMA06G13960 Glycine max GLYMA06G13960 N 0.000
GLYMA19G37740 Glycine max GLYMA19G37740 N 0.000
GRMZM2G045977 Zea mays GRMZM2G045977 N 0.000
GRMZM2G124566 Zea mays GRMZM2G124566 N 0.000
GRMZM2G178261 Zea mays GRMZM2G178261 N 0.000
GRMZM2G443903 Zea mays GRMZM2G443903 N 0.000
GRMZM5G853392 Zea mays GRMZM5G853392 N 0.000
GSMUA_Achr3G15140_001 Musa acuminata GSMUA_Achr3G15140_001 N 0.000
GSMUA_Achr3G22790_001 Musa acuminata GSMUA_Achr3G22790_001 N 0.000
GSMUA_Achr4G32310_001 Musa acuminata GSMUA_Achr4G32310_001 N 0.000
GSMUA_Achr7G27480_001 Musa acuminata GSMUA_Achr7G27480_001 N 0.000
GSMUA_Achr8G04970_001 Musa acuminata GSMUA_Achr8G04970_001 N 0.000
GSMUA_Achr8G07650_001 Musa acuminata GSMUA_Achr8G07650_001 N 0.000
GSMUA_Achr8G12060_001 Musa acuminata GSMUA_Achr8G12060_001 N 0.000
GSMUA_Achr8G26530_001 Musa acuminata GSMUA_Achr8G26530_001 N 0.000
GSMUA_AchrUn_randomG15490_001 Musa acuminata GSMUA_AchrUn_randomG15490_001 N 0.000
LPERR03G27480 Leersia perrieri LPERR03G27480 N 0.000
LPERR11G13310 Leersia perrieri LPERR11G13310 N 0.000
LPERR12G10130 Leersia perrieri LPERR12G10130 N 0.000
MLOC_67201 Hordeum vulgare MLOC_67201 N 0.000
OB11G22890 Oryza brachyantha OB11G22890 N 0.000
OB12G20240 Oryza brachyantha OB12G20240 N 0.000
OBART03G32870 Oryza barthii OBART03G32870 N 0.000
OBART11G16830 Oryza barthii OBART11G16830 N 0.000
OBART12G12240 Oryza barthii OBART12G12240 N 0.000
OGLUM03G32510 Oryza glumaepatula OGLUM03G32510 N 0.000
OGLUM11G16300 Oryza glumaepatula OGLUM11G16300 N 0.000
OGLUM12G13820 Oryza glumaepatula OGLUM12G13820 N 0.000
OLONG_005678 Oryza longistaminata OLONG_005678 N 0.000
OLONG_020244 Oryza longistaminata OLONG_020244 N 0.000
OMERI03G29560 Oryza meridionalis OMERI03G29560 N 0.000
OMERI04G16620 Oryza meridionalis OMERI04G16620 N 0.000
OMERI12G08740 Oryza meridionalis OMERI12G08740 N 0.000
ONIVA03G34380 Oryza nivara ONIVA03G34380 N 0.000
ONIVA11G16660 Oryza nivara ONIVA11G16660 N 0.000
ONIVA12G12410 Oryza nivara ONIVA12G12410 N 0.000
OPUNC03G30000 Oryza punctata OPUNC03G30000 N 0.000
OPUNC11G13830 Oryza punctata OPUNC11G13830 N 0.000
OPUNC12G10860 Oryza punctata OPUNC12G10860 N 0.000
ORGLA03G0298100 Oryza glaberrima ORGLA03G0298100 N 0.000
ORGLA11G0141300 Oryza glaberrima ORGLA11G0141300 N 0.000
ORUFI03G34250 Oryza rufipogon ORUFI03G34250 N 0.000
ORUFI11G17860 Oryza rufipogon ORUFI11G17860 N 0.000
ORUFI12G13380 Oryza rufipogon ORUFI12G13380 N 0.000
OS03G0729500 Oryza sativa OS03G0729500 N 0.000
OS12G0484900 Oryza sativa OS12G0484900 N 0.000
PGSC0003DMG400003220 Solanum tuberosum PGSC0003DMG400003220 N 0.000
PGSC0003DMG400012233 Solanum tuberosum PGSC0003DMG400012233 N 0.000
PGSC0003DMG400021403 Solanum tuberosum PGSC0003DMG400021403 N 0.000
PGSC0003DMG400028259 Solanum tuberosum PGSC0003DMG400028259 N 0.000
POPTR_0001s08310 Populus trichocarpa POPTR_0001s08310 N 0.000
POPTR_0001s11480 Populus trichocarpa POPTR_0001s11480 N 0.000
POPTR_0012s02950 Populus trichocarpa POPTR_0012s02950 N 0.000
POPTR_0015s00860 Populus trichocarpa POPTR_0015s00860 N 0.000
PRUPE_ppa006912mg Prunus persica PRUPE_ppa006912mg N 0.000
PRUPE_ppa019752mg Prunus persica PRUPE_ppa019752mg N 0.000
PRUPE_ppa024293mg Prunus persica PRUPE_ppa024293mg N 0.000
Sb01g009330 Sorghum bicolor Sb01g009330 N 0.000
Sb04g031890 Sorghum bicolor Sb04g031890 N 0.000
Si018252m.g Setaria italica Si018252m.g N 0.000
Si034822m.g Setaria italica Si034822m.g N 0.000
Solyc02g092070.2 Solanum lycopersicum Solyc02g092070.2 N 0.000
Solyc03g082430.1 Solanum lycopersicum Solyc03g082430.1 N 0.000
Solyc08g083230.1 Solanum lycopersicum Solyc08g083230.1 N 0.000
Solyc10g083510.1 Solanum lycopersicum Solyc10g083510.1 N 0.000
TCM_015497 Theobroma cacao TCM_015497 N 0.000
TCM_015625 Theobroma cacao TCM_015625 N 0.000
TCM_022490 Theobroma cacao TCM_022490 N 0.000
Traes_4AL_4954CD38D Triticum aestivum Traes_4AL_4954CD38D N 0.000
Traes_4BS_1B1F669A3 Triticum aestivum Traes_4BS_1B1F669A3 N 0.000
Traes_4DS_0FB3F3EE91 Triticum aestivum Traes_4DS_0FB3F3EE91 N 0.000
Traes_4DS_0FB3F3EE9 Triticum aestivum Traes_4DS_0FB3F3EE9 N 0.000
AtGRF8 Vitis vinifera VIT_02s0025g02680 N 0.000
VIT_08s0007g03760 Vitis vinifera VIT_08s0007g03760 N 0.000
AtGRF7 Vitis vinifera VIT_16s0098g01080 N 0.000
Ca_00772 Cicer arietinum Ca_00772 N 0.000
Ca_04035 Cicer arietinum Ca_04035 N 0.000
Cla017990 Citrullus lanatus Cla017990 N 0.000
Pm019687 Prunus mume Pm019687 N 0.000
Pm024257 Prunus mume Pm024257 N 0.000
Pm026217 Prunus mume Pm026217 N 0.000
27496.m000094 Ricinus communis 27496.m000094 N 0.000
28976.m000158 Ricinus communis 28976.m000158 N 0.000
30068.m002588 Ricinus communis 30068.m002588 N 0.000
30170.m013673 Ricinus communis 30170.m013673 N 0.000
cassava17264.m1 Manihot esculenta cassava17264.m1 N 0.000
cassava2869.m1 Manihot esculenta cassava2869.m1 N 0.000
cassava32870.m1 Manihot esculenta cassava32870.m1 N 0.000
cassava35131.m1 Manihot esculenta cassava35131.m1 N 0.000
cassava37892.valid.m1 Manihot esculenta cassava37892.valid.m1 N 0.000
cassava7966.valid.m1 Manihot esculenta cassava7966.valid.m1 N 0.000
Cucsa.378420 Cucumis sativus Cucsa.378420 N 0.000
mgf003183m Mimulus guttatus mgf003183m N 0.000
mgf011630m Mimulus guttatus mgf011630m N 0.000
mgf013307m Mimulus guttatus mgf013307m N 0.000
Aquca_076_00011 Aquilegia coerulea Aquca_076_00011 N 0.000
Aquca_122_00004 Aquilegia coerulea Aquca_122_00004 N 0.000
Bostr.19427s0054 Boechera stricta Bostr.19427s0054 N 0.000
Bostr.26833s0909 Boechera stricta Bostr.26833s0909 N 0.000
Bostr.7867s0220 Boechera stricta Bostr.7867s0220 N 0.000
Bostr.7867s1635 Boechera stricta Bostr.7867s1635 N 0.000
Cagra.1226s0080 Capsella grandiflora Cagra.1226s0080 N 0.000
Cagra.2460s0032 Capsella grandiflora Cagra.2460s0032 N 0.000
Cagra.4290s0006 Capsella grandiflora Cagra.4290s0006 N 0.000
Cagra.9757s0010 Capsella grandiflora Cagra.9757s0010 N 0.000
Carubv10004544m.g Capsella rubella Carubv10004544m.g N 0.000
Carubv10007298m.g Capsella rubella Carubv10007298m.g N 0.000
Carubv10022975m.g Capsella rubella Carubv10022975m.g N 0.000
Carubv10026610m.g Capsella rubella Carubv10026610m.g N 0.000
Ciclev10011856m.g Citrus clementina Ciclev10011856m.g N 0.000
Ciclev10019529m.g Citrus clementina Ciclev10019529m.g N 0.000
Ciclev10019828m.g Citrus clementina Ciclev10019828m.g N 0.000
Eucgr.A01418 Eucalyptus grandis Eucgr.A01418 N 0.000
Eucgr.A01534 Eucalyptus grandis Eucgr.A01534 N 0.000
Eucgr.D01674 Eucalyptus grandis Eucgr.D01674 N 0.000
evm.TU.supercontig_3.145 Carica papaya evm.TU.supercontig_3.145 N 0.000
evm.TU.supercontig_5.63 Carica papaya evm.TU.supercontig_5.63 N 0.000
gene12741-v1.0-hybrid Fragaria vesca gene12741-v1.0-hybrid N 0.000
Gorai.008G259500 Gossypium raimondii Gorai.008G259500 N 0.000
Gorai.008G265600 Gossypium raimondii Gorai.008G265600 N 0.000
Gorai.009G406500 Gossypium raimondii Gorai.009G406500 N 0.000
Lus10008268.g Linum usitatissimum Lus10008268.g N 0.000
Lus10011558.g Linum usitatissimum Lus10011558.g N 0.000
Lus10014380.g Linum usitatissimum Lus10014380.g N 0.000
Lus10019274.g Linum usitatissimum Lus10019274.g N 0.000
Lus10033236.g Linum usitatissimum Lus10033236.g N 0.000
MDP0000261112 Malus domestica MDP0000261112 N 0.000
MDP0000322576 Malus domestica MDP0000322576 N 0.000
MDP0000808163 Malus domestica MDP0000808163 N 0.000
MDP0000814056 Malus domestica MDP0000814056 N 0.000
MDP0000842815 Malus domestica MDP0000842815 N 0.000
orange1.1g009918m.g Citrus sinensis orange1.1g009918m.g N 0.000
orange1.1g010979m.g Citrus sinensis orange1.1g010979m.g N 0.000
Pavir.Hb00712 Panicum virgatum Pavir.Hb00712 N 0.000
Pavir.J06517 Panicum virgatum Pavir.J06517 N 0.000
Pavir.J11763 Panicum virgatum Pavir.J11763 N 0.000
Pavir.J29705 Panicum virgatum Pavir.J29705 N 0.000
SapurV1A.0059s0450 Salix purpurea SapurV1A.0059s0450 N 0.000
SapurV1A.0094s0370 Salix purpurea SapurV1A.0094s0370 N 0.000
SapurV1A.0755s0030 Salix purpurea SapurV1A.0755s0030 N 0.000
SapurV1A.2815s0020 Salix purpurea SapurV1A.2815s0020 N 0.000
Thhalv10000124m.g Eutrema salsugineum Thhalv10000124m.g N 0.000
Thhalv10013862m.g Eutrema salsugineum Thhalv10013862m.g N 0.000
Thhalv10024915m.g Eutrema salsugineum Thhalv10024915m.g N 0.000
Thhalv10025371m.g Eutrema salsugineum Thhalv10025371m.g N 0.000
PK14408.1 Cannabis sativa PK14408.1 N 0.000
PK16254.1 Cannabis sativa PK16254.1 N 0.000
PK17885.1 Cannabis sativa PK17885.1 N 0.000
PK26554.1 Cannabis sativa PK26554.1 N 0.000
PDK_20s1348362g001 Phoenix dactylifera PDK_20s1348362g001 N 0.000