CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EuGene.0200010250
(
Micromonas sp RCC299
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
EuGene.0200010250
T334477_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
55873
Sox
68
110
EDEANVELRLEKLIGKRWKNLDRETRDKLVAEARGEQAKLIAE
Links
Other
Sox
family TFs
Other
Micromonas sp RCC299
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EMIHUDRAFT_468050
Emiliania huxleyi
EMIHUDRAFT_468050
N
0.445
GLOINDRAFT_373
Rhizophagus irregularis
GLOINDRAFT_373
N
0.419
TRAES3BF116200180CFD_g
Triticum aestivum
TRAES3BF116200180CFD_g
N
0.416