evm.TU.supercontig_29.121 (Carica papaya)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 evm.TU.supercontig_29.121 T334498_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CRC
M07266_2.00 		Arabidopsis thaliana
TWATCATW
WATGATWA		 Dap-seq
OMalley et al.(2016)
CRC_col_a 		0.689 0.727
CRC
M07267_2.00 		Arabidopsis thaliana
GGTTAGTGTTTTGGAGTCGAATATGACTTG
CAAGTCATATTCGACTCCAAAACACTAACC		 Dap-seq
OMalley et al.(2016)
CRC_colamp_a 		0.689 0.727
YAB1
M00890_2.00 		Arabidopsis thaliana
AATAATWA
TWATTATT		 PBM
Franco-Zorrilla et al.(2014)
YAB1 		0.678 0.955
YAB5
M02486_2.00 		Arabidopsis thaliana
NNNNHRN
NYDNNNN		 PBM
Weirauch et al.(2014)
pTH7575 		0.644 0.886
YAB5
M00889_2.00 		Arabidopsis thaliana
NATRATTADNNN
NNNHTAATYATN		 PBM
Franco-Zorrilla et al.(2014)
YAB5 		0.644 0.886
INO
M02485_2.00 		Arabidopsis thaliana
NHNNNYRNNN
NNNYRNNNDN		 PBM
Weirauch et al.(2014)
pTH7516 		0.567 0.727
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_29.121 Sox 127 170

Links

Other Sox family TFs
Other Carica papaya TFs

521 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MGG_07131 Magnaporthe oryzae MGG_07131 I
FOXG_08550 Fusarium oxysporum FOXG_08550 I
FPSE_02512 Fusarium pseudograminearum FPSE_02512 I
TSTA_076120 Talaromyces stipitatus TSTA_076120 I
TRIREDRAFT_55274 Trichoderma reesei TRIREDRAFT_55274 I
KUCA_T00002773001 Kuraishia capsulata KUCA_T00002773001 I
TRIATDRAFT_34316 Trichoderma atroviride TRIATDRAFT_34316 I
M437DRAFT_14692 Aureobasidium melanogenum M437DRAFT_14692 I
M438DRAFT_323991 Aureobasidium pullulans M438DRAFT_323991 I
SPOG_02829 Schizosaccharomyces cryophilus SPOG_02829 I
SAPIO_CDS8046 Scedosporium apiospermum SAPIO_CDS8046 I
S40288_06232 Stachybotrys chartarum S40288_06232 I
S40285_00977 Stachybotrys chlorohalonata S40285_00977 I
MGG_05153 Magnaporthe oryzae MGG_05153 I
GLRG_02776 Colletotrichum graminicola GLRG_02776 I
PVAR5_3228 Byssochlamys spectabilis PVAR5_3228 I
MPH_01921 Macrophomina phaseolina MPH_01921 I
NechaG103398 Fusarium solani NechaG103398 I
OCS_01600 Ophiocordyceps sinensis OCS_01600 I
PVAR5_3215 Byssochlamys spectabilis PVAR5_3215 I
PV07_01614 Cladophialophora immunda PV07_01614 I
PV06_10546 Exophiala oligosperma PV06_10546 I
PDE_08558 Penicillium oxalicum PDE_08558 I
PFICI_05184 Pestalotiopsis fici PFICI_05184 I
PV05_03077 Exophiala xenobiotica PV05_03077 I
PMAA_041870 Talaromyces marneffei PMAA_041870 I
PV04_10066 Capronia semiimmersa PV04_10066 I
FFUJ_04988 Fusarium fujikuroi FFUJ_04988 I
PMAA_041870 Penicillium marneffei PMAA_041870 I
ACRE_013750 Acremonium chrysogenum ACRE_013750 I
AUEXF2481DRAFT_24415 Aureobasidium subglaciale AUEXF2481DRAFT_24415 I
BBA_01514 Beauveria bassiana BBA_01514 I
Bcin04g01240 Botrytis cinerea Bcin04g01240 I
Kwal_6732 Kluyveromyces waltii Kwal_6732 I
ACLA_040090 Aspergillus clavatus CADACLAG00003413 I
fgenesh1_pm.00168_#_452 Aspergillus carbonarius fgenesh1_pm.00168_#_452 I
NFIA_065070 Neosartorya fischeri CADNFIAG00006114 I
e_gw1.3.1267.1 Cryphonectria parasitica e_gw1.3.1267.1 I
estExt_fgenesh1_pm.C_sca_18_chr2_1_00326 Nectria haematococca estExt_fgenesh1_pm.C_sca_18_chr2_1_00326 I
CCM_04341 Cordyceps militaris CCM_04341 I
CFIO01_12268 Colletotrichum fioriniae CFIO01_12268 I
CGGC5_8784 Colletotrichum gloeosporioides CGGC5_8784 I
CGGC5_2102 Colletotrichum gloeosporioides CGGC5_2102 I
FGRRES_06160 Fusarium graminearum FGRRES_06160 I
X797_008651 Metarhizium robertsii X797_008651 I
F503_05786 Ophiostoma piceae uamh F503_05786 I
CSUB01_08743 Colletotrichum sublineola CSUB01_08743 I
VHEMI03513 Torrubiella hemipterigena VHEMI03513 I
VDAG_08992 Verticillium dahliae VDAG_08992 I
CLUG_01645 Candida lusitaniae CLUG_01645 N
Pc12g02800 Penicillium chrysogenum Pc12g02800 N
PV06_08173 Exophiala oligosperma PV06_08173 N
V499_04479 Pseudogymnoascus pannorum V499_04479 N
XP_002490409.1 Pichia pastoris XP_002490409.1 N
PV07_04955 Cladophialophora immunda PV07_04955 N
PV10_09026 Exophiala mesophila PV10_09026 N
PV11_05379 Exophiala sideris PV11_05379 N
TRIVIDRAFT_28488 Trichoderma virens TRIVIDRAFT_28488 N
X797_005336 Metarhizium robertsii X797_005336 N
Z519_09408 Cladophialophora bantiana Z519_09408 N
SS1G_01353 Sclerotinia sclerotiorum SS1G_01353 N
ZYRO0B00242g Zygosaccharomyces rouxii ZYRO0B00242g N
GNLVRS01_PISO0H16309g Millerozyma farinosa GNLVRS01_PISO0H16309g N
CPAG_05114 Candida parapsilosis CPAG_05114 N
PGUG_01274 Candida guilliermondii PGUG_01274 N
A1O5_08185 Cladophialophora psammophila A1O5_08185 N
BDDG_05568 Blastomyces dermatitidis BDDG_05568 N
ATEG_08244 Aspergillus terreus CADATEAG00003887 N
CaO19.13413 Candida albicans CaO19.13413 N
CaO19.5992 Candida albicans CaO19.5992 N
CD36_85150 Candida dubliniensis CD36_85150 N
CH063_01368 Colletotrichum higginsianum CH063_01368 N
CLUG_01645 Clavispora lusitaniae CLUG_01645 N
CORT_0C04810 Candida orthopsilosis CORT_0C04810 N
CTRG_02521 Candida tropicalis CTRG_02521 N
DEHA2E17842g Debaryomyces hansenii DEHA2E17842g N
G210_4588 Candida maltosa G210_4588 N
GNLVRS01_PISO0G16308g Millerozyma farinosa GNLVRS01_PISO0G16308g N
PGUG_01274 Meyerozyma guilliermondii PGUG_01274 N
HCBG_03369 Histoplasma capsulatum HCBG_03369 N
LELG_02863 Lodderomyces elongisporus LELG_02863 N
MAC_00726 Metarhizium acridum MAC_00726 N
MAJ_01716 Metarhizium majus MAJ_01716 N
MAM_03911 Metarhizium album MAM_03911 N
MANI_020691 Metarhizium anisopliae MANI_020691 N
MBR_00349 Metarhizium brunneum MBR_00349 N
MGU_01192 Metarhizium guizhouense MGU_01192 N
OIDMADRAFT_160412 Oidiodendron maius OIDMADRAFT_160412 N
PAAG_02753 Paracoccidioides sp lutzii PAAG_02753 N
PABG_03226 Paracoccidioides brasiliensis PABG_03226 N
PAS_chr1-4_0290 Komagataella pastoris PAS_chr1-4_0290 N
PCH_Pc12g02800 Penicillium rubens PCH_Pc12g02800 N
PDE_06431 Penicillium oxalicum PDE_06431 N
PEX1_064660 Penicillium expansum PEX1_064660 N