CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMU15013231
(
Schmidtea mediterranea
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SMU15013231
T335010_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15013231
Sox
10
80
PSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYE
SMU15013231
Sox
102
168
PKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSKYEEMNKEAKEKYNLAMLEYK
Links
Other
Sox
family TFs
Other
Schmidtea mediterranea
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
qa-1F
Neurospora crassa
NCU06028
D
xlr-1
Neurospora crassa
NCU06971
D
SNOG_08740
Stagonospora nodorum
SNOG_08740
I
VDBG_01258
Verticillium albo atrum
VDBG_01258
I
VDBG_08512
Verticillium albo atrum
VDBG_08512
I
A1O3_06596
Capronia epimyces
A1O3_06596
I
ACRE_046260
Acremonium chrysogenum
ACRE_046260
I
AOL_s00086g1
Arthrobotrys oligospora
AOL_s00086g1
I
AUEXF2481DRAFT_46715
Aureobasidium subglaciale
AUEXF2481DRAFT_46715
I
BAUCODRAFT_304562
Baudoinia compniacensis
BAUCODRAFT_304562
I
Bcin12g02060
Botrytis cinerea
Bcin12g02060
I
ACLA_024020
Aspergillus clavatus
CADACLAG00001897
I
ACLA_074570
Aspergillus clavatus
CADACLAG00006464
I
CADAFLAG00003424
Aspergillus flavus
CADAFLAG00003424
I
AFUA_2G15620
Aspergillus fumigatus
CADAFUAG00004842
I
AFUA_1G11620
Aspergillus fumigatus
CADAFUAG00007545
I
CADANGAG00006707
Aspergillus niger
CADANGAG00006707
I
CADANGAG00012260
Aspergillus niger
CADANGAG00012260
I
ANIA_07610
Aspergillus nidulans
CADANIAG00000725
I
CADAORAG00005871
Aspergillus oryzae
CADAORAG00005871
I
CADAORAG00009053
Aspergillus oryzae
CADAORAG00009053
I
ATEG_02432
Aspergillus terreus
CADATEAG00004930
I
ATEG_00354
Aspergillus terreus
CADATEAG00006864
I
NFIA_013920
Neosartorya fischeri
CADNFIAG00001881
I
CFIO01_09528
Colletotrichum fioriniae
CFIO01_09528
I
CH063_12953
Colletotrichum higginsianum
CH063_12953
I
CMQ_4177
Grosmannia clavigera
CMQ_4177
I
COCC4DRAFT_183452
Bipolaris maydis
COCC4DRAFT_183452
I
COCC4DRAFT_71230
Bipolaris maydis
COCC4DRAFT_71230
I
COCCADRAFT_90908
Bipolaris zeicola
COCCADRAFT_90908
I
COCMIDRAFT_102049
Bipolaris oryzae
COCMIDRAFT_102049
I
COCMIDRAFT_81700
Bipolaris oryzae
COCMIDRAFT_81700
I
COCSADRAFT_166376
Bipolaris sorokiniana
COCSADRAFT_166376
I
COCSADRAFT_76883
Bipolaris sorokiniana
COCSADRAFT_76883
I
COCVIDRAFT_37179
Bipolaris victoriae
COCVIDRAFT_37179
I
COCVIDRAFT_89906
Bipolaris victoriae
COCVIDRAFT_89906
I
CSUB01_03920
Colletotrichum sublineola
CSUB01_03920
I
DICSQDRAFT_139215
Dichomitus squalens
DICSQDRAFT_139215
I
DOTSEDRAFT_73784
Dothistroma septosporum
DOTSEDRAFT_73784
I
DOTSEDRAFT_74570
Dothistroma septosporum
DOTSEDRAFT_74570
I
DRE_01419
Drechslerella stenobrocha
DRE_01419
I
DRE_02232
Drechslerella stenobrocha
DRE_02232
I
EURHEDRAFT_500027
Aspergillus ruber
EURHEDRAFT_500027
I
F503_01662
Ophiostoma piceae uamh
F503_01662
I
F503_06755
Ophiostoma piceae uamh
F503_06755
I
FFUJ_04566
Fusarium fujikuroi
FFUJ_04566
I
FGRRES_17662
Fusarium graminearum
FGRRES_17662
I
FPSE_07164
Fusarium pseudograminearum
FPSE_07164
I
GGTG_00383
Gaeumannomyces graminis
GGTG_00383
I
GGTG_03663
Gaeumannomyces graminis
GGTG_03663
I
GLRG_07125
Colletotrichum graminicola
GLRG_07125
I
GLRG_07228
Colletotrichum graminicola
GLRG_07228
I
GMDG_06572
Pseudogymnoascus destructans
GMDG_06572
I
GSTUM_00004347001
Tuber melanosporum
GSTUM_00004347001
I
H072_1723
Dactylellina haptotyla
H072_1723
I
H072_2001
Dactylellina haptotyla
H072_2001
I
HMPREF1624_00871
Sporothrix schenckii
HMPREF1624_00871
I
HMPREF1624_07664
Sporothrix schenckii
HMPREF1624_07664
I
LEMA_P035060.1
Leptosphaeria maculans
LEMA_P035060.1
I
M413DRAFT_167868
Hebeloma cylindrosporum
M413DRAFT_167868
I
M413DRAFT_446153
Hebeloma cylindrosporum
M413DRAFT_446153
I
M437DRAFT_41113
Aureobasidium melanogenum
M437DRAFT_41113
I
M438DRAFT_373756
Aureobasidium pullulans
M438DRAFT_373756
I
MAPG_01170
Magnaporthe poae
MAPG_01170
I
MAPG_07478
Magnaporthe poae
MAPG_07478
I
MBM_00813
Marssonina brunnea
MBM_00813
I
MGG_01414
Magnaporthe oryzae
MGG_01414
I
MGG_07777
Magnaporthe oryzae
MGG_07777
I
MPH_01982
Macrophomina phaseolina
MPH_01982
I
MYCFIDRAFT_190593
Pseudocercospora fijiensis
MYCFIDRAFT_190593
I
Mycgr3G47382
Zymoseptoria tritici
Mycgr3G47382
I
MYCTH_2067244
Myceliophthora thermophila
MYCTH_2067244
I
MYCTH_2310145
Myceliophthora thermophila
MYCTH_2310145
I
NechaG96746
Fusarium solani
NechaG96746
I
NEUTE1DRAFT_147986
Neurospora tetrasperma
NEUTE1DRAFT_147986
I
NEUTE1DRAFT_80073
Neurospora tetrasperma
NEUTE1DRAFT_80073
I
OIDMADRAFT_199854
Oidiodendron maius
OIDMADRAFT_199854
I
PCH_Pc13g08420
Penicillium rubens
PCH_Pc13g08420
I
PCH_Pc21g02790
Penicillium rubens
PCH_Pc21g02790
I
PDE_07674
Penicillium oxalicum
PDE_07674
I
PDIP_30830
Penicillium digitatum
PDIP_30830
I
PEX1_036960
Penicillium expansum
PEX1_036960
I
PEX1_052050
Penicillium expansum
PEX1_052050
I
PFICI_05114
Pestalotiopsis fici
PFICI_05114
I
PFICI_15081
Pestalotiopsis fici
PFICI_15081
I
PITC_082180
Penicillium italicum
PITC_082180
I
PMAA_036650
Talaromyces marneffei
PMAA_036650
I
PODANS_1_23020
Podospora anserina
PODANS_1_23020
I
PODANS_5_5100
Podospora anserina
PODANS_5_5100
I
PTT_14914
Pyrenophora teres
PTT_14914
I
PV09_01109
Verruconis gallopava
PV09_01109
I
PV10_02516
Exophiala mesophila
PV10_02516
I
S40285_05834
Stachybotrys chlorohalonata
S40285_05834
I
S40288_02557
Stachybotrys chartarum
S40288_02557
I
S40288_09944
Stachybotrys chartarum
S40288_09944
I
SAPIO_CDS7493
Scedosporium apiospermum
SAPIO_CDS7493
I
SBOR_4248
Sclerotinia borealis
SBOR_4248
I
SEPMUDRAFT_150184
Sphaerulina musiva
SEPMUDRAFT_150184
I
SEPMUDRAFT_151346
Sphaerulina musiva
SEPMUDRAFT_151346
I
SETTUDRAFT_31256
Setosphaeria turcica
SETTUDRAFT_31256
I
SMAC_00770
Sordaria macrospora
SMAC_00770
I
SMAC_07407
Sordaria macrospora
SMAC_07407
I
SNOG_08740
Phaeosphaeria nodorum
SNOG_08740
I
prt1
Schizosaccharomyces pombe
SPBC530.05
I
SPBR_06407
Sporothrix brasiliensis
SPBR_06407
I
SS1G_08351
Sclerotinia sclerotiorum
SS1G_08351
I
THITE_2116895
Thielavia terrestris
THITE_2116895
I
THITE_2122523
Thielavia terrestris
THITE_2122523
I
TRIATDRAFT_295508
Trichoderma atroviride
TRIATDRAFT_295508
I
TRIATDRAFT_78601
Trichoderma atroviride
TRIATDRAFT_78601
I
TRIREDRAFT_122208
Trichoderma reesei
TRIREDRAFT_122208
I
TRIREDRAFT_2148
Trichoderma reesei
TRIREDRAFT_2148
I
TRIVIDRAFT_33603
Trichoderma virens
TRIVIDRAFT_33603
I
TRIVIDRAFT_58714
Trichoderma virens
TRIVIDRAFT_58714
I
TSTA_055480
Talaromyces stipitatus
TSTA_055480
I
U727_00431323311
Penicillium solitum
U727_00431323311
I
UCRNP2_4108
Neofusicoccum parvum
UCRNP2_4108
I
UV8b_3245
Ustilaginoidea virens
UV8b_3245
I
V499_08073
Pseudogymnoascus pannorum
V499_08073
I
VDAG_08004
Verticillium dahliae
VDAG_08004
I
VDAG_08177
Verticillium dahliae
VDAG_08177
I
VDBG_01258
Verticillium alfalfae
VDBG_01258
I
VDBG_08512
Verticillium alfalfae
VDBG_08512
I
VHEMI00533
Torrubiella hemipterigena
VHEMI00533
I
W97_04550
Coniosporium apollinis
W97_04550
I
e_gw1.9.639.1
Mycosphaerella graminicola
e_gw1.9.639.1
I
estExt_Genewise1.C_80993
Neurospora discreta
estExt_Genewise1.C_80993
I
estExt_Genewise1Plus.C_120594
Neurospora discreta
estExt_Genewise1Plus.C_120594
I
estExt_Genewise1Plus.C_150252
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_150252
I
estExt_Genewise1Plus.C_20967
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_20967
I
fgenesh1_pm.C_scaffold_10000002
Mycosphaerella fijiensis
fgenesh1_pm.C_scaffold_10000002
I
fgenesh1_pm.sca_82_chr10_2_0000188
Nectria haematococca
fgenesh1_pm.sca_82_chr10_2_0000188
I
AB00609.1
Alternaria brassicicola
AB00609.1
I
e_gw1.00083.116.1
Aspergillus carbonarius
e_gw1.00083.116.1
I
e_gw1.00815.24.1
Aspergillus carbonarius
e_gw1.00815.24.1
I
Pc13g08420
Penicillium chrysogenum
Pc13g08420
I
Pc21g02790
Penicillium chrysogenum
Pc21g02790
I
PMAA_036650
Penicillium marneffei
PMAA_036650
I
A1O9_06191
Exophiala aquamarina
A1O9_06191
N
PHACADRAFT_253195
Phanerochaete carnosa
PHACADRAFT_253195
N