Kwal_8043 (Kluyveromyces waltii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Kwal_8043 T335262_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IXR1
M08429_2.00 		Saccharomyces cerevisiae
CMCCGCTYCCGGYTT
AARCCGGRAGCGGKG		 ChIP-chip
Mathelier et al.(2014)
MA0323.1 		0.619 0.691
IXR1
M11345_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$IXR1_01 		0.619 0.691
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Kwal_8043 Sox 254 322
Kwal_8043 Sox 327 393

Links

Other Sox family TFs
Other Kluyveromyces waltii TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI2G24790 Brachypodium distachyon BRADI2G24790 N
F775_32837 Aegilops tauschii F775_32837 N
GRMZM2G104400 Zea mays GRMZM2G104400 N
GRMZM2G456568 Zea mays GRMZM2G456568 N
Sb09g020880 Sorghum bicolor Sb09g020880 N
Traes_1AL_C4FA8404A Triticum aestivum Traes_1AL_C4FA8404A N
Traes_1BL_9018AA7BA Triticum aestivum Traes_1BL_9018AA7BA N
Traes_1DL_F410CF9FD Triticum aestivum Traes_1DL_F410CF9FD N
TRIUR3_22935 Triticum urartu TRIUR3_22935 N
Pavir.J02083 Panicum virgatum Pavir.J02083 N
Pavir.J07259 Panicum virgatum Pavir.J07259 N