CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

SPER_0000261701 *(Spirometra erinaceieuropaei)* Sox
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00505 (HMG_box)	IPR000910	SPER_0000261701	T336998_2.00	WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Tcf7 M00193_2.00	Mus musculus	HNHNNNNNN	NNNNNNDND	PBM Badis et al.(2009) Tcf7_0950	0.510	0.712
Tcf7l2 M00198_2.00	Mus musculus	NSWTCAAAVN	NBTTTGAWSN	PBM Badis et al.(2009) Tcf7l2_3461	0.510	0.712
Tcf7 M03532_2.00	Mus musculus	AAASATCAAAGV	BCTTTGATSTTT	SELEX Jolma et al.(2013) Tcf7_1	0.510	0.712
TCF7 M05755_2.00	Homo sapiens	DSATCAAWS	SWTTGATSH	SELEX Yin et al.(2017) TCF7_eDBD_HT-SELEX_1	0.510	0.712
TCF7 M05756_2.00	Homo sapiens	WCWKCGYCYCGWTGW	WCAWCGRGRCGMWGW	SELEX Yin et al.(2017) TCF7_eDBD_HT-SELEX_2	0.510	0.712
TCF7 M05890_2.00	Homo sapiens	NNASATCAAASNN	NNSTTTGATSTNN	SMiLE-seq Isakova et al.(2017) TCF7	0.510	0.712
Tcf7l2 M02646_2.00	Mus musculus	SATCAAAGN	NCTTTGATS	SELEX Hallikas et al.(2006) Tcf4	0.510	0.712
TCF7L2 M08167_2.00	Homo sapiens	NVASWTCAAAGVVN	NBBCTTTGAWSTBN	ChIP-seq Mathelier et al.(2014) MA0523.1	0.510	0.712
TCF7L2 M09393_2.00	Homo sapiens	DGCAGSTGKS	SMCASCTGCH	Misc Kulakovskiy et al.(2013) ITF2_HUMAN.H11MO.0.C	0.510	0.712
TCF7 M09386_2.00	Homo sapiens	NBBCTTTSAWSTBNBN	NVNVASWTSAAAGVVN	Misc Kulakovskiy et al.(2013) TCF7_HUMAN.H11MO.0.A	0.510	0.712
TCF7L2 M09394_2.00	Homo sapiens	VVASWTCAAAGVV	BBCTTTGAWSTBB	Misc Kulakovskiy et al.(2013) TF7L2_HUMAN.H11MO.0.A	0.510	0.712
Tcf7 M09400_2.00	Mus musculus	VVRVADSAAARVVVNV	BNBBBYTTTSHTBYBB	Misc Kulakovskiy et al.(2013) TCF7_MOUSE.H11MO.0.A	0.510	0.712
Tcf7l2 M09401_2.00	Mus musculus	VVASWTCAAAGVV	BBCTTTGAWSTBB	Misc Kulakovskiy et al.(2013) TF7L2_MOUSE.H11MO.0.A	0.510	0.712
TCF7L2 M09638_2.00	Homo sapiens	CCTTTGAWST	ASWTCAAAGG	Misc Heinz et al.(2010) K562-TCF7L2_GSE29196	0.510	0.712
TCF7 M11294_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TCF1_Q5_01	0.510	0.712
TCF7 M11295_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TCF1_Q5	0.510	0.712
TCF7L2 M11316_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TCF4_Q5_01	0.510	0.712
TCF7L2 M11317_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TCF4_Q5_02	0.510	0.712
TCF7L2 M11318_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TCF4_Q5	0.510	0.712
TCF7L2 M11319_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TCF7L2_06	0.510	0.712
TCF7 M05757_2.00	Homo sapiens	RSATCAAAS	STTTGATSY	SELEX Yin et al.(2017) TCF7_eDBD_Methyl-HT-SELEX_1	0.510	0.712
TCF7 M05758_2.00	Homo sapiens	WCAWCGRGRCGMWGW	WCWKCGYCYCGWTGW	SELEX Yin et al.(2017) TCF7_eDBD_Methyl-HT-SELEX_2	0.510	0.712
Lef1 M00200_2.00	Mus musculus	NSWTCAAAVN	NBTTTGAWSN	PBM Badis et al.(2009) Lef1_3504	0.510	0.697
LEF1 M03511_2.00	Homo sapiens	NRAGATCAAAGRVWW	WWBYCTTTGATCTYN	SELEX Jolma et al.(2013) LEF1_1	0.510	0.697
LEF1 M05771_2.00	Homo sapiens	NSATCAAAS	STTTGATSN	SELEX Yin et al.(2017) LEF1_eDBD_HT-SELEX_1	0.510	0.697
LEF1 M05772_2.00	Homo sapiens	WCATCGRGRCGCTGW	WCAGCGYCYCGATGW	SELEX Yin et al.(2017) LEF1_eDBD_HT-SELEX_2	0.510	0.697
LEF1 M05775_2.00	Homo sapiens	ASATCAAAG	CTTTGATST	SELEX Yin et al.(2017) LEF1_FL_HT-SELEX_1	0.510	0.697
LEF1 M05776_2.00	Homo sapiens	ACATCGRGRCGCTGW	WCAGCGYCYCGATGT	SELEX Yin et al.(2017) LEF1_FL_HT-SELEX_2	0.510	0.697
LEF1 M05895_2.00	Homo sapiens	WTCAAAGNNN	NNNCTTTGAW	SMiLE-seq Isakova et al.(2017) LEF1	0.510	0.697
LEF1 M09392_2.00	Homo sapiens	BSYTTTSWNNTBYH	DRVANNWSAAARSV	Misc Kulakovskiy et al.(2013) LEF1_HUMAN.H11MO.0.A	0.510	0.697
Lef1 M09402_2.00	Mus musculus	BSYTTTSWNNTBYH	DRVANNWSAAARSV	Misc Kulakovskiy et al.(2013) LEF1_MOUSE.H11MO.0.B	0.510	0.697
LEF1 M11311_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LEF1_Q2_01	0.510	0.697
LEF1 M11312_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LEF1_Q3	0.510	0.697
LEF1 M11313_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LEF1_Q4	0.510	0.697
LEF1 M11314_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LEF1_Q5_01	0.510	0.697
LEF1 M11315_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LEF1_Q5	0.510	0.697
LEF1 M05773_2.00	Homo sapiens	ASATCAAAG	CTTTGATST	SELEX Yin et al.(2017) LEF1_eDBD_Methyl-HT-SELEX_1	0.510	0.697
LEF1 M05774_2.00	Homo sapiens	WCATCGRGGCGCTGW	WCAGCGCCYCGATGW	SELEX Yin et al.(2017) LEF1_eDBD_Methyl-HT-SELEX_2	0.510	0.697
LEF1 M05777_2.00	Homo sapiens	ASATCAAAG	CTTTGATST	SELEX Yin et al.(2017) LEF1_FL_Methyl-HT-SELEX_1	0.510	0.697
LEF1 M05778_2.00	Homo sapiens	ACATCGRGRCGCTGW	WCAGCGYCYCGATGT	SELEX Yin et al.(2017) LEF1_FL_Methyl-HT-SELEX_2	0.510	0.697
Tcf7l1 M00207_2.00	Mus musculus	NNNNWWDN	NHWWNNNN	PBM Badis et al.(2009) Tcf3_3787	0.510	0.712
TCF7L1 M03512_2.00	Homo sapiens	AAAGATCAAAGG	CCTTTGATCTTT	SELEX Jolma et al.(2013) TCF7L1_1	0.510	0.712
TCF7L1 M05779_2.00	Homo sapiens	RSATCAAAG	CTTTGATSY	SELEX Yin et al.(2017) TCF7L1_eDBD_HT-SELEX_1	0.510	0.712
TCF7L1 M05780_2.00	Homo sapiens	ACATCGRGRCGCTGW	WCAGCGYCYCGATGT	SELEX Yin et al.(2017) TCF7L1_eDBD_HT-SELEX_2	0.510	0.712
TCF7L1 M09395_2.00	Homo sapiens	NBBCTTTGAWSTB	VASWTCAAAGVVN	Misc Kulakovskiy et al.(2013) TF7L1_HUMAN.H11MO.0.B	0.510	0.712
Tcf7l1 M09406_2.00	Mus musculus	BBCTTTGAWST	ASWTCAAAGVV	Misc Kulakovskiy et al.(2013) TF7L1_MOUSE.H11MO.0.A	0.510	0.712
Tcf7l1 M09407_2.00	Mus musculus	NDGCAGSTGBB	VVCASCTGCHN	Misc Kulakovskiy et al.(2013) TFE2_MOUSE.H11MO.0.A	0.510	0.712
TCF7L1 M11320_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TCF3_01	0.510	0.712
TCF7L1 M11321_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TCF3_Q6_01	0.510	0.712
TCF7L1 M11322_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TCF3_Q6	0.510	0.712
TCF7L1 M05781_2.00	Homo sapiens	CTTTGATSY	RSATCAAAG	SELEX Yin et al.(2017) TCF7L1_eDBD_Methyl-HT-SELEX_1	0.510	0.712
TCF7L1 M05782_2.00	Homo sapiens	ACATCGRGRCGCTGW	WCAGCGYCYCGATGT	SELEX Yin et al.(2017) TCF7L1_eDBD_Methyl-HT-SELEX_2	0.510	0.712
pan M06451_2.00	Drosophila melanogaster	DWYCAAAD	HTTTGRWH	B1H Zhu et al.(2011) pan_FlyReg_FBgn0085432	0.502	0.712
pan M08428_2.00	Drosophila melanogaster	WHNAAAVRNRSCGM	KCGSYNYBTTTNDW	ChIP-chip Mathelier et al.(2014) MA0237.2	0.502	0.712
pan M11337_2.00	Drosophila melanogaster	AAGATCAAAGG	CCTTTGATCTT	Transfac Matys et al.(2006) I$TCF_1	0.502	0.712
pan M11338_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$TCF_Q6	0.502	0.712
pop-1 M00712_2.00	Caenorhabditis elegans	NNHDWVNNNN	NNNNBWHDNN	PBM Narasimhan et al.(2015) pTH9135	0.472	0.576
For this family, TFs with SR scores > 0.415* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
SPER_0000261701-mRNA-1	Sox	76	141	IKKPLNAFMLFMKEMRPKIQEECTLKESAAINQILGKKWHELSKPEQSKYYEMARKEKEIHRQVCK

Links
Other Sox family TFs
Other *Spirometra erinaceieuropaei* TFs

493 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
Aan_R002988	Calypte anna	Aan_R002988	N	0.000
ENSONIG00000002625	Oreochromis niloticus	ENSONIG00000002625	N	0.000
ENSOPRG00000009921	Ochotona princeps	ENSOPRG00000009921	N	0.000
ENSPFOG00000014180	Poecilia formosa	ENSPFOG00000014180	N	0.000
ENSPPYG00000018696	Pongo abelii	ENSPPYG00000018696	N	0.000
ENSPSIG00000013063	Pelodiscus sinensis	ENSPSIG00000013063	N	0.000
Zbtb10	Rattus norvegicus	ENSRNOG00000061862	N	0.000
ENSSHAG00000016594	Sarcophilus harrisii	ENSSHAG00000016594	N	0.000
ZBTB10	Sus scrofa	ENSSSCG00000006155	N	0.000
ENSTBEG00000007066	Tupaia belangeri	ENSTBEG00000007066	N	0.000
ZBTB10	Taeniopygia guttata	ENSTGUG00000011647	N	0.000
ENSTSYG00000001300	Tarsius syrichta	ENSTSYG00000001300	N	0.000
ENSTTRG00000011546	Tursiops truncatus	ENSTTRG00000011546	N	0.000
ZBTB10	Vicugna pacos	ENSVPAG00000001137	N	0.000
ENSXMAG00000003598	Xiphophorus maculatus	ENSXMAG00000003598	N	0.000
ZBTB10	Oryctolagus cuniculus	ENSOCUG00000001857	N	0.000
Afo_R005153	Aptenodytes forsteri	Afo_R005153	N	0.000
Alligator_sinensis_CCG021075.1	Alligator sinensis	Alligator_sinensis_CCG021075.1	N	0.000
Brh_R013306	Buceros rhinoceros	Brh_R013306	N	0.000
Cmyd_10016916	Chelonia mydas	Cmyd_10016916	N	0.000
ENSP00000387462-D1	Bos grunniens	ENSP00000387462-D1	N	0.000
ENSP00000416134	Macaca fascicularis	ENSP00000416134	N	0.000
Gfo_R007549	Geospiza fortis	Gfo_R007549	N	0.000
Myotis_brandtii_ZBTB10_10004815	Myotis brandtii	Myotis_brandtii_ZBTB10_10004815	N	0.000
Myotis_brandtii_ZBTB10_10021365	Myotis brandtii	Myotis_brandtii_ZBTB10_10021365	N	0.000
Ogr14045	Ophisaurus gracilis	Ogr14045	N	0.000
Pvit_00067	Pogona vitticeps	Pvit_00067	N	0.000
Tal_R000969	Tyto alba	Tal_R000969	N	0.000
zbtb10	Xenopus tropicalis	XB-GENE-1021753	N	0.000
XP_002936664	Xenopus tropicalis	XP_002936664	N	0.000
zbtb10	Gasterosteus aculeatus	ENSGACG00000003437	N	0.000
ENSAMEG00000015019	Ailuropoda melanoleuca	ENSAMEG00000015019	N	0.000
ENSAMXG00000011157	Astyanax mexicanus	ENSAMXG00000011157	N	0.000
ENSAPLG00000004757	Anas platyrhynchos	ENSAPLG00000004757	N	0.000
ZBTB10	Canis familiaris	ENSCAFG00000008416	N	0.000
ZBTB10	Callithrix jacchus	ENSCJAG00000000454	N	0.000
ZBTB10	Cavia porcellus	ENSCPOG00000013700	N	0.000
zbtb10	Danio rerio	ENSDARG00000077101	N	0.000
ZBTB10	Dasypus novemcinctus	ENSDNOG00000037012	N	0.000
Zbtb10	Dipodomys ordii	ENSDORG00000001337	N	0.000
ENSECAG00000013073	Equus caballus	ENSECAG00000013073	N	0.000
ZBTB10	Echinops telfairi	ENSETEG00000000095	N	0.000
ENSFALG00000008618	Ficedula albicollis	ENSFALG00000008618	N	0.000
ZBTB10	Felis catus	ENSFCAG00000027371	N	0.000
ZBTB10	Homo sapiens	ENSG00000205189	N	0.000
ENSACAG00000027698	Anolis carolinensis	ENSACAG00000027698	N	0.000
ENSGALG00000015747	Gallus gallus	ENSGALG00000015747	N	0.000
ZBTB10	Gorilla gorilla	ENSGGOG00000015527	N	0.000
ENSGMOG00000017819	Gadus morhua	ENSGMOG00000017819	N	0.000
ENSLACG00000013384	Latimeria chalumnae	ENSLACG00000013384	N	0.000
ZBTB10	Loxodonta africana	ENSLAFG00000012881	N	0.000
ENSLOCG00000002796	Lepisosteus oculatus	ENSLOCG00000002796	N	0.000
ENSMEUG00000004276	Macropus eugenii	ENSMEUG00000004276	N	0.000
ENSMGAG00000011634	Meleagris gallopavo	ENSMGAG00000011634	N	0.000
ZBTB10	Microcebus murinus	ENSMICG00000007243	N	0.000
ENSMLUG00000005829	Myotis lucifugus	ENSMLUG00000005829	N	0.000
ENSMLUG00000014934	Myotis lucifugus	ENSMLUG00000014934	N	0.000
ENSMLUG00000027816	Myotis lucifugus	ENSMLUG00000027816	N	0.000
ZBTB10	Macaca mulatta	ENSMMUG00000008438	N	0.000
Zbtb10	Mus musculus	ENSMUSG00000069114	N	0.000

SPER_0000261701 (Spirometra erinaceieuropaei) Sox

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

493 Related TFs

SPER_0000261701 **(Spirometra erinaceieuropaei)
Sox**