SROB_0001231001 (Schistosoma rodhaini)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SROB_0001231001 T337021_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02819
M02490_2.00 		Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN		 PBM
Weirauch et al.(2014)
pTH9672 		0.424 0.338
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SROB_0001231001-mRNA-1 Sox 11 78

Links

Other Sox family TFs
Other Schistosoma rodhaini TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Zscan2 Rattus norvegicus ENSRNOG00000022164 N 0.000
ENSNLEG00000011329 Nomascus leucogenys ENSNLEG00000011329 N 0.000
ENSOARG00000013148 Ovis aries ENSOARG00000013148 N 0.000
ZSCAN2 Oryctolagus cuniculus ENSOCUG00000007308 N 0.000
ZSCAN2 Otolemur garnettii ENSOGAG00000007268 N 0.000
ZSCAN2 Ochotona princeps ENSOPRG00000002700 N 0.000
ENSPANG00000000536 Papio anubis ENSPANG00000000536 N 0.000
ENSPPYG00000006877 Pongo abelii ENSPPYG00000006877 N 0.000
ZSCAN2 Pan troglodytes ENSPTRG00000007400 N 0.000
Zscan2 Mus musculus ENSMUSG00000038797 N 0.000
ZSCAN2 Sorex araneus ENSSARG00000014372 N 0.000
ENSSHAG00000015790 Sarcophilus harrisii ENSSHAG00000015790 N 0.000
ENSSTOG00000001741 Ictidomys tridecemlineatus ENSSTOG00000001741 N 0.000
ENSTSYG00000009785 Tarsius syrichta ENSTSYG00000009785 N 0.000
ENSP00000325123-D1 Bos grunniens ENSP00000325123-D1 N 0.000
ENSP00000325123 Macaca fascicularis ENSP00000325123 N 0.000
Myotis_brandtii_ZSCAN2_10013218 Myotis brandtii Myotis_brandtii_ZSCAN2_10013218 N 0.000
ZSCAN2 Erinaceus europaeus ENSEEUG00000006493 N 0.000
ZSCAN2 Bos taurus ENSBTAG00000001385 N 0.000
ZSCAN2 Canis familiaris ENSCAFG00000012858 N 0.000
ZSCAN2 Choloepus hoffmanni ENSCHOG00000006276 N 0.000
ZSCAN2 Callithrix jacchus ENSCJAG00000016119 N 0.000
ENSCPOG00000008991 Cavia porcellus ENSCPOG00000008991 N 0.000
ENSCSAG00000017237 Chlorocebus sabaeus ENSCSAG00000017237 N 0.000
ZSCAN2 Dasypus novemcinctus ENSDNOG00000033566 N 0.000
ZSCAN2 Equus caballus ENSECAG00000022470 N 0.000
ENSAMEG00000013989 Ailuropoda melanoleuca ENSAMEG00000013989 N 0.000
ZSCAN2 Felis catus ENSFCAG00000025011 N 0.000
ZSCAN2 Homo sapiens ENSG00000176371 N 0.000
ZSCAN2 Gorilla gorilla ENSGGOG00000014609 N 0.000
ZSCAN2 Loxodonta africana ENSLAFG00000001521 N 0.000
ENSMICG00000015919 Microcebus murinus ENSMICG00000015919 N 0.000
ZSCAN2 Macaca mulatta ENSMMUG00000022080 N 0.000
ENSMPUG00000015626 Mustela putorius furo ENSMPUG00000015626 N 0.000