CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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T265_15292
(
Opisthorchis viverrini
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
T265_15292
T337109_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
T265_15292
Sox
11
78
PRKPPTAFMLYVKHRRLQSEQLASLPFGERNRILGSEWSNLPADQKAGFFNEAKELRDKYTQLLAEYK
Links
Other
Sox
family TFs
Other
Opisthorchis viverrini
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-par_contig_4505-snap-gene-0.0
Pythium arrhenomanes
maker-par_contig_4505-snap-gene-0.0
N
fgenesh1_kg.C_scaffold_4000617
Phytophthora capsici
fgenesh1_kg.C_scaffold_4000617
N