CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10007079
(
Chelonia mydas
)
STAT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02864 (STAT_bind)
IPR013801
Cmyd_10007079
T337820_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
STAT3
M08172_2.00
Homo sapiens
HTTCCHRGMAV
BTKCYDGGAAD
ChIP-seq
Mathelier et al.(2014)
MA0144.2
1.000
1.000
STAT3
M08015_2.00
Homo sapiens
YDTTTMYYRGAARHSABVDB
VHBVTSDYTTCYRRKAAAHR
ChIP-seq
Gerstein et al.(2012)
GM12878_STAT3_Stanford
1.000
1.000
STAT3
M08016_2.00
Homo sapiens
NNNTTCCHRKAAN
NTTMYDGGAANNN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_STAT3_Stanford
1.000
1.000
STAT3
M08017_2.00
Homo sapiens
NNHTTCCYRKMANNN
NNNTKMYRGGAADNN
ChIP-seq
Gerstein et al.(2012)
MCF10A-Er-Src_STAT3_Harvard#Weissman
1.000
1.000
STAT3
M08018_2.00
Homo sapiens
NNHTTCCYRKMANNN
NNNTKMYRGGAADNN
ChIP-seq
Gerstein et al.(2012)
MCF10A-Er-Src_STAT3_Stanford
1.000
1.000
Stat3
M08043_2.00
Mus musculus
BTTCCYRGMAD
HTKCYRGGAAV
ChIP-seq
Chen et al.(2011)
SRP000217_Stat3
1.000
1.000
STAT3
M09415_2.00
Homo sapiens
NNYTTCCMRGAA
TTCYKGGAARNN
Misc
Kulakovskiy et al.(2013)
STAT3_HUMAN.H11MO.0.A
1.000
1.000
Stat3
M09419_2.00
Mus musculus
NNYTTMCHRKMA
TKMYDGKAARNN
Misc
Kulakovskiy et al.(2013)
STAT3_MOUSE.H11MO.0.A
1.000
1.000
Stat3
M09645_2.00
Mus musculus
NNBTTCCNGGAAVN
NBTTCCNGGAAVNN
Misc
Heinz et al.(2010)
CD4-Stat3_GSE19198
1.000
1.000
STAT3
M11367_2.00
Homo sapiens
NBBBATTTCCSGGAARTGNNN
NNNCAYTTCCSGGAAATVVVN
Transfac
Matys et al.(2006)
V$STAT3_01
1.000
1.000
STAT3
M11368_2.00
Homo sapiens
NNNTTCCN
NGGAANNN
Transfac
Matys et al.(2006)
V$STAT3_02
1.000
1.000
STAT3
M11369_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAT3_03
1.000
1.000
STAT3
M11370_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAT3_Q4
1.000
1.000
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10007079
STAT
321
573
FVVERQPCMPMHPDRPLVIKTGVQFTTKVRLLVKFPELNYQLKIKVCIDKDSGDVAALRGSRKFNILGTNTKVMNMEESNNGSLSAEFKHLTLREQRCGNGGRANCDASLIVTEELHLITFETEVYHQGLKIDLETHSLPVVVISNICQMPNAWASILWYNMLTNNPKNVNFFTKPPIGTWDQVAEVLSWQFSSTTKRGLSIEQLTTLAEKLLGPGVNYSGCQITWAKFCKENMAGKGFSFWVWLDNIIDLVK
Links
Other
STAT
family TFs
Other
Chelonia mydas
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
S40288_03056
Stachybotrys chartarum
S40288_03056
N