CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R001510
(
Geospiza fortis
)
STAT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02864 (STAT_bind)
IPR013801
Gfo_R001510
T337836_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R001510
STAT
8
226
IPVQRPQLLEKVNFLLYNLFRRLLIKLPELNYQIRVKATIDNNRRFVLCGTHVKAMNMDESANGSLSVEFRHLGPHMVTEELHSISFETQVCLYGLTINLETSSLPVVMISNVSQLPNAWASIIWYNLSTNDPQNLSFFNNPPAATLSQLLEVLSWQFSSYVGRGLNSEQLNMLAEKLTGQQVSYNDYQLSWAKFCKEHLPGKSFTFWVWLEAILDLIK
Gfo_R001510
STAT
753
877
DPDPITKNKQFLQDLTHKLFQQLIQRLLVKLQELNYNLKVKVLFDKDVTEKNSVKGYVASEFDILTLDLITFSLSLCRFRKFNILGTNTKVMNMEESTNGSLAAEFRHLQLKEQKNTGSRTNETT
Gfo_R001510
STAT
873
994
TNETTSLPIVVISNVSQLPSGWASILWFNMLSTDPKNLSFFLNPPCAKWSKLSDVLSWQFSSVTKRGLNADQLSMLGEKLLGPTNGGSQDGLIPWTRFCKENLNDKNFPFWLWIEGILELIK
Links
Other
STAT
family TFs
Other
Geospiza fortis
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OLONG_013234
Oryza longistaminata
OLONG_013234
N
0.000
Pavir.J16240
Panicum virgatum
Pavir.J16240
N
0.000
Pavir.Ia00281
Panicum virgatum
Pavir.Ia00281
N
0.000
Traes_5BL_DF8EC4A24
Triticum aestivum
Traes_5BL_DF8EC4A24
N
0.000
Si034627m.g
Setaria italica
Si034627m.g
N
0.000
Sb01g003110
Sorghum bicolor
Sb01g003110
N
0.000
OS04G0590400
Oryza sativa
OS04G0590400
N
0.000
ORUFI04G25140
Oryza rufipogon
ORUFI04G25140
N
0.000
ORGLA04G0200000
Oryza glaberrima
ORGLA04G0200000
N
0.000
ONIVA04G22790
Oryza nivara
ONIVA04G22790
N
0.000
BGIOSGA017023
Oryza indica
BGIOSGA017023
N
0.000
OGLUM04G23390
Oryza glumaepatula
OGLUM04G23390
N
0.000
OBART04G23460
Oryza barthii
OBART04G23460
N
0.000
OB04G30360
Oryza brachyantha
OB04G30360
N
0.000
MLOC_2933
Hordeum vulgare
MLOC_2933
N
0.000
LPERR04G19190
Leersia perrieri
LPERR04G19190
N
0.000
GRMZM2G368909
Zea mays
GRMZM2G368909
N
0.000
F775_04155
Aegilops tauschii
F775_04155
N
0.000
BRADI1G03620
Brachypodium distachyon
BRADI1G03620
N
0.000