Gfo_R009044 (Geospiza fortis)
STAT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02864 (STAT_bind) IPR013801 Gfo_R009044 T337837_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STAT3
M08172_2.00 		Homo sapiens
HTTCCHRGMAV
BTKCYDGGAAD		 ChIP-seq
Mathelier et al.(2014)
MA0144.2 		1.000 1.000
STAT3
M08015_2.00 		Homo sapiens
YDTTTMYYRGAARHSABVDB
VHBVTSDYTTCYRRKAAAHR		 ChIP-seq
Gerstein et al.(2012)
GM12878_STAT3_Stanford 		1.000 1.000
STAT3
M08016_2.00 		Homo sapiens
NNNTTCCHRKAAN
NTTMYDGGAANNN		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_STAT3_Stanford 		1.000 1.000
STAT3
M08017_2.00 		Homo sapiens
NNHTTCCYRKMANNN
NNNTKMYRGGAADNN		 ChIP-seq
Gerstein et al.(2012)
MCF10A-Er-Src_STAT3_Harvard#Weissman 		1.000 1.000
STAT3
M08018_2.00 		Homo sapiens
NNHTTCCYRKMANNN
NNNTKMYRGGAADNN		 ChIP-seq
Gerstein et al.(2012)
MCF10A-Er-Src_STAT3_Stanford 		1.000 1.000
Stat3
M08043_2.00 		Mus musculus
BTTCCYRGMAD
HTKCYRGGAAV		 ChIP-seq
Chen et al.(2011)
SRP000217_Stat3 		1.000 1.000
STAT3
M09415_2.00 		Homo sapiens
NNYTTCCMRGAA
TTCYKGGAARNN		 Misc
Kulakovskiy et al.(2013)
STAT3_HUMAN.H11MO.0.A 		1.000 1.000
Stat3
M09419_2.00 		Mus musculus
NNYTTMCHRKMA
TKMYDGKAARNN		 Misc
Kulakovskiy et al.(2013)
STAT3_MOUSE.H11MO.0.A 		1.000 1.000
Stat3
M09645_2.00 		Mus musculus
NNBTTCCNGGAAVN
NBTTCCNGGAAVNN		 Misc
Heinz et al.(2010)
CD4-Stat3_GSE19198 		1.000 1.000
STAT3
M11367_2.00 		Homo sapiens
NBBBATTTCCSGGAARTGNNN
NNNCAYTTCCSGGAAATVVVN		 Transfac
Matys et al.(2006)
V$STAT3_01 		1.000 1.000
STAT3
M11368_2.00 		Homo sapiens
NNNTTCCN
NGGAANNN		 Transfac
Matys et al.(2006)
V$STAT3_02 		1.000 1.000
STAT3
M11369_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAT3_03 		1.000 1.000
STAT3
M11370_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAT3_Q4 		1.000 1.000
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R009044 STAT 321 573

Links

Other STAT family TFs
Other Geospiza fortis TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CFIO01_12411 Colletotrichum fioriniae CFIO01_12411 N
CGGC5_9160 Colletotrichum gloeosporioides CGGC5_9160 N
CSUB01_10338 Colletotrichum sublineola CSUB01_10338 N
GLRG_10663 Colletotrichum graminicola GLRG_10663 N
MAC_08477 Metarhizium acridum MAC_08477 N
MAJ_03455 Metarhizium majus MAJ_03455 N
MANI_000800 Metarhizium anisopliae MANI_000800 N
MBR_06946 Metarhizium brunneum MBR_06946 N
X797_008492 Metarhizium robertsii X797_008492 N