CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Al_scaffold_0007_3014
(
Arabidopsis lyrata
)
Storekeeper
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04504 (DUF573)
IPR007592
Al_scaffold_0007_3014
T338183_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
STKL1
M02492_2.00
Arabidopsis thaliana
NNNNVBNNNN
NNNNVBNNNN
PBM
Weirauch et al.(2014)
pTH7440
0.708
0.708
STKL2
M07271_2.00
Arabidopsis thaliana
WWYMTTATCCAHW
WDTGGATAAKRWW
Dap-seq
OMalley et al.(2016)
AT4G00250_col_a
0.708
0.708
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Al_scaffold_0007_3014
Storekeeper
69
157
LHRLWTEEDEISDRRNMIDFKAETGTSPHDDLNKFFDIAKKSISFDVSKSQFGDKIRGLKKKYFGKRKKKSVESDHDKKCLGLVKSIWG
Links
Other
Storekeeper
family TFs
Other
Arabidopsis lyrata
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
STKL1
Arabidopsis thaliana
AT4G00238
D
0.708
STKL2
Arabidopsis thaliana
AT4G00250
D
0.708
AT1G44810
Arabidopsis thaliana
AT1G44810
N
0.775