CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10020457m.g
(
Capsella rubella
)
Storekeeper
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04504 (DUF573)
IPR007592
Carubv10020457m.g
T338987_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT4G00390
M01085_2.00
Arabidopsis thaliana
NACCGGTCNNNN
NNNNGACCGGTN
PBM
Sullivan et al.(2014)
pTH9305
0.739
0.739
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10020457m
Storekeeper
156
247
FQRLWTEDDEIAVLQGMIDFKADTGKSPYEDTNAFYDFIKKSISFEVSKNQFMDKIRSLRKKYTAKGKTGVEPSFSKAHDQKSYELSKFIWG
Links
Other
Storekeeper
family TFs
Other
Capsella rubella
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGAP003439
Anopheles gambiae
AGAP003439
N
AMAM004087
Anopheles maculatus
AMAM004087
N