Carubv10025028m.g (Capsella rubella)
Storekeeper

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04504 (DUF573) IPR007592 Carubv10025028m.g T338990_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GEBP
M02493_2.00 		Arabidopsis thaliana
KCGGCCGD
HCGGCCGM		 PBM
Weirauch et al.(2014)
pTH7529 		0.768 0.768
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10025028m Storekeeper 72 166

Links

Other Storekeeper family TFs
Other Capsella rubella TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000003936 Astyanax mexicanus ENSAMXG00000003936 N
her15.1 Danio rerio ENSDARG00000054560 N
her15.1 Danio rerio ENSDARG00000054562 N
her12 Gasterosteus aculeatus ENSGACG00000006352 N
ENSGMOG00000003187 Gadus morhua ENSGMOG00000003187 N
her12 Oryzias latipes ENSORLG00000003967 N
ENSPFOG00000013558 Poecilia formosa ENSPFOG00000013558 N
her12 Tetraodon nigroviridis ENSTNIG00000011997 N
her12 Takifugu rubripes ENSTRUG00000015665 N
ENSXMAG00000018899 Xiphophorus maculatus ENSXMAG00000018899 N
AAH43639 Xenopus laevis AAH43639 N
AAK63839 Xenopus laevis AAK63839 N
hes5.1 Xenopus tropicalis XB-GENE-481135 N
hes5.2.S Xenopus laevis XB-GENE-6253436 N
hes5.1.S Xenopus laevis XB-GENE-865445 N