ENSFALG00000007778 (Ficedula albicollis)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSFALG00000007778 T339864_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbx5
M00833_2.00 		Mus musculus
AGGTGTBA
TVACACCT		 PBM
Weirauch et al.(2013)
pTH3775 		0.920 1.000
TBX5
M03552_2.00 		Homo sapiens
AGGTGTBA
TVACACCT		 SELEX
Jolma et al.(2013)
TBX5_1 		0.920 1.000
TBX5
M03553_2.00 		Homo sapiens
AGGTGTKANWWNTVACACCT
AGGTGTBANWWNTMACACCT		 SELEX
Jolma et al.(2013)
TBX5_2 		0.920 1.000
Tbx5
M09649_2.00 		Mus musculus
AGGTGHBA
TVDCACCT		 Misc
Heinz et al.(2010)
HL1-Tbx5.biotin_GSE21529 		0.920 1.000
TBX5
M11374_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_01 		0.920 1.000
TBX5
M11375_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_02 		0.920 1.000
Tbx5
M11387_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_05 		0.920 1.000
TBX5
M11376_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_Q2 		0.920 1.000
TBX5
M11377_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_Q5 		0.920 1.000
Tbx4
M00831_2.00 		Mus musculus
AGGTGTBA
TVACACCT		 PBM
Weirauch et al.(2013)
pTH3973 		0.899 0.934
TBX4
M03558_2.00 		Homo sapiens
AGGTGTBA
TVACACCT		 SELEX
Jolma et al.(2013)
TBX4_1 		0.899 0.934
TBX4
M03559_2.00 		Homo sapiens
AGGTGTBANWWNTVACACBT
AVGTGTBANWWNTVACACCT		 SELEX
Jolma et al.(2013)
TBX4_2 		0.899 0.934
XP_008203914.1
M01029_2.00 		Nasonia vitripennis
AGGTGTBA
TVACACCT		 PBM
SebePedros et al.(2013)
pTH9336 		0.804 0.615
Tbx2
M00830_2.00 		Mus musculus
NYVDCACBHN
NDVGTGHBRN		 PBM
Weirauch et al.(2013)
pTH3751 		0.799 0.654
TBX2
M03556_2.00 		Homo sapiens
GGTGTKADDWNTVACACB
VGTGTBANWHHTMACACC		 SELEX
Jolma et al.(2013)
TBX2_1 		0.799 0.654
TBX2
M03557_2.00 		Homo sapiens
NAGGTGTBAWN
NWTVACACCTN		 SELEX
Jolma et al.(2013)
TBX2_2 		0.799 0.654
TBX2
M05799_2.00 		Homo sapiens
NNVRCRCNNN
NNNGYGYBNN		 SELEX
Yin et al.(2017)
TBX2_eDBD_HT-SELEX 		0.799 0.654
Tbx2
M08044_2.00 		Mus musculus
GCHYBCTGGGADHTGTAGTYH
DRACTACADHTCCCAGVRDGC		 ChIP-seq
Chen et al.(2011)
SRP001585_Tbx2 		0.799 0.654
TBX2
M11381_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX2_Q2 		0.799 0.654
TBX2
M11382_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX2_Q5 		0.799 0.654
TBX2
M05800_2.00 		Homo sapiens
NNVRCRCBNN
NNVGYGYBNN		 SELEX
Yin et al.(2017)
TBX2_eDBD_Methyl-HT-SELEX 		0.799 0.654
Tbx3
M00834_2.00 		Mus musculus
NHNDCACNHN
NDNGTGHNDN		 PBM
Weirauch et al.(2013)
pTH3998 		0.797 0.637
TBX3
M05801_2.00 		Homo sapiens
NDSGTGTBRN
NYVACACSHN		 SELEX
Yin et al.(2017)
TBX3_eDBD_HT-SELEX 		0.797 0.637
TBX3
M09426_2.00 		Homo sapiens
DVDGGTGBNAR
YTNVCACCHBH		 Misc
Kulakovskiy et al.(2013)
TBX3_HUMAN.H11MO.0.C 		0.797 0.637
Tbx3
M09429_2.00 		Mus musculus
RRGGTGBBR
YVVCACCYY		 Misc
Kulakovskiy et al.(2013)
TBX3_MOUSE.H11MO.0.B 		0.797 0.637
TBX3
M05802_2.00 		Homo sapiens
DAGGTGTKAN
NTMACACCTH		 SELEX
Yin et al.(2017)
TBX3_eDBD_Methyl-HT-SELEX 		0.797 0.637
XP_001195863
M02498_2.00 		Strongylocentrotus purpuratus
AGGTGTBA
TVACACCT		 PBM
Weirauch et al.(2014)
pTH9340 		0.793 0.692
estExt_fgenesh2_pg.C_1570024
M01030_2.00 		Branchiostoma floridae
NHNDCACNHN
NDNGTGHNDN		 PBM
SebePedros et al.(2013)
pTH9244 		0.787 0.681
TBX2
M02495_2.00 		Gasterosteus aculeatus
NNVDCACNHN
NDNGTGHBNN		 PBM
Weirauch et al.(2014)
pTH9182 		0.767 0.637
TBX2
M02496_2.00 		Takifugu rubripes
DAGGTGTBRN
NYVACACCTH		 PBM
Weirauch et al.(2014)
pTH9289 		0.767 0.632
Tbx20
M00835_2.00 		Mus musculus
NRRGTGTBAN
NTVACACYYN		 PBM
Weirauch et al.(2013)
pTH3777 		0.754 0.610
TBX20
M03565_2.00 		Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_1 		0.754 0.610
TBX20
M03566_2.00 		Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT		 SELEX
Jolma et al.(2013)
TBX20_2 		0.754 0.610
TBX20
M03567_2.00 		Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN		 SELEX
Jolma et al.(2013)
TBX20_3 		0.754 0.610
TBX20
M03568_2.00 		Homo sapiens
DAGGTGTGAWR
YWTCACACCTH		 SELEX
Jolma et al.(2013)
TBX20_4 		0.754 0.610
TBX20
M03569_2.00 		Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_5 		0.754 0.610
TBX20
M05813_2.00 		Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1 		0.754 0.610
TBX20
M05814_2.00 		Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2 		0.754 0.610
TBX20
M05817_2.00 		Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1 		0.754 0.610
TBX20
M05818_2.00 		Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2 		0.754 0.610
Tbx20
M09430_2.00 		Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN		 Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C 		0.754 0.610
Tbx20
M09650_2.00 		Mus musculus
SCTGTCADCASN
NSTGHTGACAGS		 Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636 		0.754 0.610
TBX20
M11385_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX20_05 		0.754 0.610
TBX20
M05815_2.00 		Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1 		0.754 0.610
TBX20
M05816_2.00 		Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2 		0.754 0.610
TBX20
M05819_2.00 		Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1 		0.754 0.610
TBX20
M05820_2.00 		Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2 		0.754 0.610
Eomes
M00215_2.00 		Mus musculus
RDGTGYBANN
NNTVRCACHY		 PBM
Badis et al.(2009)
Eomes_0921 		0.739 0.549
EOMES
M03563_2.00 		Homo sapiens
DAGGTGTGAWNNN
NNNWTCACACCTH		 SELEX
Jolma et al.(2013)
EOMES_1 		0.739 0.544
EOMES
M03564_2.00 		Homo sapiens
TVACACNTNNNDRNGTGTGA
TCACACNYHNNNANGTGTBA		 SELEX
Jolma et al.(2013)
EOMES_2 		0.739 0.544
EOMES
M02752_2.00 		Homo sapiens
AGGTGTGAW
WTCACACCT		 SELEX
Jolma et al.(2010)
EOMES_monomer 		0.739 0.544
EOMES
M05807_2.00 		Homo sapiens
DAGGTGTGAN
NTCACACCTH		 SELEX
Yin et al.(2017)
EOMES_eDBD_HT-SELEX 		0.739 0.544
EOMES
M09647_2.00 		Homo sapiens
ARGTGWKAAN
NTTMWCACYT		 Misc
Heinz et al.(2010)
H9-Eomes_GSE26097 		0.739 0.544
EOMES
M05808_2.00 		Homo sapiens
NABGTGYKAH
DTMRCACVTN		 SELEX
Yin et al.(2017)
EOMES_eDBD_Methyl-HT-SELEX 		0.739 0.544
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSFALP00000008122 T-box 79 261

Links

Other T-box family TFs
Other Ficedula albicollis TFs

416 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FGRRES_01100 Fusarium graminearum FGRRES_01100 D
ATEG_04171 Aspergillus terreus CADATEAG00009984 D
PV04_10601 Capronia semiimmersa PV04_10601 I
SAPIO_CDS3097 Scedosporium apiospermum SAPIO_CDS3097 I
S40288_08800 Stachybotrys chartarum S40288_08800 I
S40285_01877 Stachybotrys chlorohalonata S40285_01877 I
PVAR5_3236 Byssochlamys spectabilis PVAR5_3236 I
PV11_06012 Exophiala sideris PV11_06012 I
PV10_01019 Exophiala mesophila PV10_01019 I
PV08_06661 Exophiala spinifera PV08_06661 I
PV07_12240 Cladophialophora immunda PV07_12240 I
PV06_07195 Exophiala oligosperma PV06_07195 I
PV05_02773 Exophiala xenobiotica PV05_02773 I
SBOR_0341 Sclerotinia borealis SBOR_0341 I
PODANS_1_2230 Podospora anserina PODANS_1_2230 I
PITC_036250 Penicillium italicum PITC_036250 I
PFICI_01897 Pestalotiopsis fici PFICI_01897 I
PEX1_077160 Penicillium expansum PEX1_077160 I
PDIP_75510 Penicillium digitatum PDIP_75510 I
PDE_04931 Penicillium oxalicum PDE_04931 I
PCH_Pc18g00190 Penicillium rubens PCH_Pc18g00190 I
OIDMADRAFT_194382 Oidiodendron maius OIDMADRAFT_194382 I
OCS_00016 Ophiocordyceps sinensis OCS_00016 I
NEUTE1DRAFT_133183 Neurospora tetrasperma NEUTE1DRAFT_133183 I
NechaG98757 Fusarium solani NechaG98757 I
MYCTH_2294145 Myceliophthora thermophila MYCTH_2294145 I
VDBG_05845 Verticillium alfalfae VDBG_05845 I
Pc18g00190 Penicillium chrysogenum Pc18g00190 I
fgenesh1_pm.C_scaffold_5000435 Cryphonectria parasitica fgenesh1_pm.C_scaffold_5000435 I
fgenesh1_pm.00866_#_491 Aspergillus carbonarius fgenesh1_pm.00866_#_491 I
estExt_fgenesh3_pm.C_70282 Neurospora discreta estExt_fgenesh3_pm.C_70282 I
estExt_fgenesh1_pg.C_sca_1_chr1_3_00273 Nectria haematococca estExt_fgenesh1_pg.C_sca_1_chr1_3_00273 I
estExt_fgenesh1_kg.C_chr_160021 Mycosphaerella graminicola estExt_fgenesh1_kg.C_chr_160021 I
Z519_06193 Cladophialophora bantiana Z519_06193 I
Z518_06261 Rhinocladiella mackenziei Z518_06261 I
Z517_12283 Fonsecaea pedrosoi Z517_12283 I
X797_003774 Metarhizium robertsii X797_003774 I
VHEMI06514 Torrubiella hemipterigena VHEMI06514 I
MGU_04884 Metarhizium guizhouense MGU_04884 I
VDAG_03007 Verticillium dahliae VDAG_03007 I
UV8b_5567 Ustilaginoidea virens UV8b_5567 I
U727_00433932271 Penicillium solitum U727_00433932271 I
TSTA_096850 Talaromyces stipitatus TSTA_096850 I
TRIVIDRAFT_42882 Trichoderma virens TRIVIDRAFT_42882 I
TRIREDRAFT_57059 Trichoderma reesei TRIREDRAFT_57059 I
THITE_2131584 Thielavia terrestris THITE_2131584 I
SS1G_04522 Sclerotinia sclerotiorum SS1G_04522 I
SPBR_06725 Sporothrix brasiliensis SPBR_06725 I
SMAC_02983 Sordaria macrospora SMAC_02983 I
SEPMUDRAFT_122411 Sphaerulina musiva SEPMUDRAFT_122411 I
BGHDH14_bgh01184 Blumeria graminis BGHDH14_bgh01184 I
CSUB01_02498 Colletotrichum sublineola CSUB01_02498 I
CPUR_03335 Claviceps purpurea CPUR_03335 I
Cob_03876 Colletotrichum orbiculare Cob_03876 I
CH063_05074 Colletotrichum higginsianum CH063_05074 I
CGGC5_5664 Colletotrichum gloeosporioides CGGC5_5664 I
CFIO01_01433 Colletotrichum fioriniae CFIO01_01433 I
CCM_06184 Cordyceps militaris CCM_06184 I
CADAORAG00001369 Aspergillus oryzae CADAORAG00001369 I
CADANGAG00002342 Aspergillus niger CADANGAG00002342 I
CADAFLAG00002414 Aspergillus flavus CADAFLAG00002414 I
ACLA_040020 Aspergillus clavatus CADACLAG00003199 I
CTHT_0056810 Chaetomium thermophilum CTHT_0056810 I
Bcin01g06200 Botrytis cinerea Bcin01g06200 I
BBA_00148 Beauveria bassiana BBA_00148 I
BAUCODRAFT_120297 Baudoinia compniacensis BAUCODRAFT_120297 I
ARB_01788 Arthroderma benhamiae ARB_01788 I
ACRE_069570 Acremonium chrysogenum ACRE_069570 I
A1O9_06349 Exophiala aquamarina A1O9_06349 I
A1O7_09958 Cladophialophora yegresii A1O7_09958 I
A1O5_07631 Cladophialophora psammophila A1O5_07631 I
A1O3_10315 Capronia epimyces A1O3_10315 I
A1O1_06861 Capronia coronata A1O1_06861 I
VDBG_05845 Verticillium albo atrum VDBG_05845 I
HMPREF1120_01778 Exophiala dermatitidis HMPREF1120_01778 I
SPPG_06166 Spizellomyces punctatus SPPG_06166 I
MGG_11712 Magnaporthe oryzae MGG_11712 I
MBR_03692 Metarhizium brunneum MBR_03692 I
MBM_06173 Marssonina brunnea MBM_06173 I
MAPG_09676 Magnaporthe poae MAPG_09676 I
MANI_109748 Metarhizium anisopliae MANI_109748 I
MAM_06825 Metarhizium album MAM_06825 I
MAJ_02218 Metarhizium majus MAJ_02218 I
MAC_05257 Metarhizium acridum MAC_05257 I
HMPREF1624_00506 Sporothrix schenckii HMPREF1624_00506 I
HMPREF1541_02811 Cyphellophora europaea HMPREF1541_02811 I
Mycgr3G106635 Zymoseptoria tritici Mycgr3G106635 I
H105_08795 Trichophyton soudanense H105_08795 I
H102_08770 Trichophyton rubrum H102_08770 I
GLRG_04370 Colletotrichum graminicola GLRG_04370 I
GGTG_12202 Gaeumannomyces graminis GGTG_12202 I
G647_08323 Cladophialophora carrionii G647_08323 I
FVEG_01221 Fusarium verticillioides FVEG_01221 I
FPSE_09056 Fusarium pseudograminearum FPSE_09056 I
FOXG_00297 Fusarium oxysporum FOXG_00297 I
FFUJ_01281 Fusarium fujikuroi FFUJ_01281 I
F503_07224 Ophiostoma piceae uamh F503_07224 I
EURHEDRAFT_516147 Aspergillus ruber EURHEDRAFT_516147 I