ENSFALG00000007792 (Ficedula albicollis)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSFALG00000007792 T339865_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbx3
M00834_2.00 		Mus musculus
NHNDCACNHN
NDNGTGHNDN		 PBM
Weirauch et al.(2013)
pTH3998 		0.920 0.978
TBX3
M05801_2.00 		Homo sapiens
NDSGTGTBRN
NYVACACSHN		 SELEX
Yin et al.(2017)
TBX3_eDBD_HT-SELEX 		0.920 0.978
TBX3
M09426_2.00 		Homo sapiens
DVDGGTGBNAR
YTNVCACCHBH		 Misc
Kulakovskiy et al.(2013)
TBX3_HUMAN.H11MO.0.C 		0.920 0.978
Tbx3
M09429_2.00 		Mus musculus
RRGGTGBBR
YVVCACCYY		 Misc
Kulakovskiy et al.(2013)
TBX3_MOUSE.H11MO.0.B 		0.920 0.978
TBX3
M05802_2.00 		Homo sapiens
DAGGTGTKAN
NTMACACCTH		 SELEX
Yin et al.(2017)
TBX3_eDBD_Methyl-HT-SELEX 		0.920 0.978
Tbx2
M00830_2.00 		Mus musculus
NYVDCACBHN
NDVGTGHBRN		 PBM
Weirauch et al.(2013)
pTH3751 		0.906 0.950
TBX2
M03556_2.00 		Homo sapiens
GGTGTKADDWNTVACACB
VGTGTBANWHHTMACACC		 SELEX
Jolma et al.(2013)
TBX2_1 		0.906 0.950
TBX2
M03557_2.00 		Homo sapiens
NAGGTGTBAWN
NWTVACACCTN		 SELEX
Jolma et al.(2013)
TBX2_2 		0.906 0.950
TBX2
M05799_2.00 		Homo sapiens
NNVRCRCNNN
NNNGYGYBNN		 SELEX
Yin et al.(2017)
TBX2_eDBD_HT-SELEX 		0.906 0.950
Tbx2
M08044_2.00 		Mus musculus
GCHYBCTGGGADHTGTAGTYH
DRACTACADHTCCCAGVRDGC		 ChIP-seq
Chen et al.(2011)
SRP001585_Tbx2 		0.906 0.950
TBX2
M11381_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX2_Q2 		0.906 0.950
TBX2
M11382_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX2_Q5 		0.906 0.950
TBX2
M05800_2.00 		Homo sapiens
NNVRCRCBNN
NNVGYGYBNN		 SELEX
Yin et al.(2017)
TBX2_eDBD_Methyl-HT-SELEX 		0.906 0.950
TBX2
M02495_2.00 		Gasterosteus aculeatus
NNVDCACNHN
NDNGTGHBNN		 PBM
Weirauch et al.(2014)
pTH9182 		0.875 0.945
TBX2
M02496_2.00 		Takifugu rubripes
DAGGTGTBRN
NYVACACCTH		 PBM
Weirauch et al.(2014)
pTH9289 		0.875 0.939
XP_008203914.1
M01029_2.00 		Nasonia vitripennis
AGGTGTBA
TVACACCT		 PBM
SebePedros et al.(2013)
pTH9336 		0.840 0.867
estExt_fgenesh2_pg.C_1570024
M01030_2.00 		Branchiostoma floridae
NHNDCACNHN
NDNGTGHNDN		 PBM
SebePedros et al.(2013)
pTH9244 		0.819 0.713
Tbx5
M00833_2.00 		Mus musculus
AGGTGTBA
TVACACCT		 PBM
Weirauch et al.(2013)
pTH3775 		0.797 0.657
TBX5
M03552_2.00 		Homo sapiens
AGGTGTBA
TVACACCT		 SELEX
Jolma et al.(2013)
TBX5_1 		0.797 0.657
TBX5
M03553_2.00 		Homo sapiens
AGGTGTKANWWNTVACACCT
AGGTGTBANWWNTMACACCT		 SELEX
Jolma et al.(2013)
TBX5_2 		0.797 0.657
Tbx5
M09649_2.00 		Mus musculus
AGGTGHBA
TVDCACCT		 Misc
Heinz et al.(2010)
HL1-Tbx5.biotin_GSE21529 		0.797 0.657
TBX5
M11374_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_01 		0.797 0.657
TBX5
M11375_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_02 		0.797 0.657
Tbx5
M11387_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_05 		0.797 0.657
TBX5
M11376_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_Q2 		0.797 0.657
TBX5
M11377_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_Q5 		0.797 0.657
XP_001195863
M02498_2.00 		Strongylocentrotus purpuratus
AGGTGTBA
TVACACCT		 PBM
Weirauch et al.(2014)
pTH9340 		0.794 0.718
Tbx4
M00831_2.00 		Mus musculus
AGGTGTBA
TVACACCT		 PBM
Weirauch et al.(2013)
pTH3973 		0.783 0.657
TBX4
M03558_2.00 		Homo sapiens
AGGTGTBA
TVACACCT		 SELEX
Jolma et al.(2013)
TBX4_1 		0.783 0.657
TBX4
M03559_2.00 		Homo sapiens
AGGTGTBANWWNTVACACBT
AVGTGTBANWWNTVACACCT		 SELEX
Jolma et al.(2013)
TBX4_2 		0.783 0.657
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSFALP00000008133 T-box 107 288

Links

Other T-box family TFs
Other Ficedula albicollis TFs

328 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCU02957 Neurospora crassa NCU02957 D
SMAC_00493 Sordaria macrospora SMAC_00493 I
MBR_03633 Metarhizium brunneum MBR_03633 I
MGG_10837 Magnaporthe oryzae MGG_10837 I
MGU_04823 Metarhizium guizhouense MGU_04823 I
MYCTH_2296905 Myceliophthora thermophila MYCTH_2296905 I
NEUTE1DRAFT_150703 Neurospora tetrasperma NEUTE1DRAFT_150703 I
OIDMADRAFT_110480 Oidiodendron maius OIDMADRAFT_110480 I
OIDMADRAFT_57256 Oidiodendron maius OIDMADRAFT_57256 I
PFICI_01786 Pestalotiopsis fici PFICI_01786 I
PODANS_1_18420 Podospora anserina PODANS_1_18420 I
S40285_00887 Stachybotrys chlorohalonata S40285_00887 I
S40288_08146 Stachybotrys chartarum S40288_08146 I
SAPIO_CDS5040 Scedosporium apiospermum SAPIO_CDS5040 I
SBOR_5241 Sclerotinia borealis SBOR_5241 I
MAPG_00558 Magnaporthe poae MAPG_00558 I
SPBR_01576 Sporothrix brasiliensis SPBR_01576 I
SS1G_01995 Sclerotinia sclerotiorum SS1G_01995 I
THITE_2112332 Thielavia terrestris THITE_2112332 I
TRIREDRAFT_122371 Trichoderma reesei TRIREDRAFT_122371 I
TRIVIDRAFT_35604 Trichoderma virens TRIVIDRAFT_35604 I
UV8b_5697 Ustilaginoidea virens UV8b_5697 I
VDAG_03292 Verticillium dahliae VDAG_03292 I
VDBG_06134 Verticillium alfalfae VDBG_06134 I
VHEMI06417 Torrubiella hemipterigena VHEMI06417 I
X797_003690 Metarhizium robertsii X797_003690 I
estExt_Genewise1.C_40527 Neurospora discreta estExt_Genewise1.C_40527 I
estExt_fgenesh1_pm.C_140003 Cryphonectria parasitica estExt_fgenesh1_pm.C_140003 I
CTHT_0009000 Chaetomium thermophilum CTHT_0009000 I
ACRE_079180 Acremonium chrysogenum ACRE_079180 I
BBA_04449 Beauveria bassiana BBA_04449 I
Bcin07g02960 Botrytis cinerea Bcin07g02960 I
BOTBODRAFT_92498 Botryobasidium botryosum BOTBODRAFT_92498 I
CCM_07005 Cordyceps militaris CCM_07005 I
CFIO01_10932 Colletotrichum fioriniae CFIO01_10932 I
CGGC5_4872 Colletotrichum gloeosporioides CGGC5_4872 I
CH063_09324 Colletotrichum higginsianum CH063_09324 I
CHGG_05891 Chaetomium globosum CHGG_05891 I
CMQ_8013 Grosmannia clavigera CMQ_8013 I
Cob_08105 Colletotrichum orbiculare Cob_08105 I
CPUR_03253 Claviceps purpurea CPUR_03253 I
CSUB01_03838 Colletotrichum sublineola CSUB01_03838 I
VDBG_06134 Verticillium albo atrum VDBG_06134 I
F503_01009 Ophiostoma piceae uamh F503_01009 I
FFUJ_01365 Fusarium fujikuroi FFUJ_01365 I
FGRRES_15831 Fusarium graminearum FGRRES_15831 I
FOXG_00218 Fusarium oxysporum FOXG_00218 I
FPSE_02604 Fusarium pseudograminearum FPSE_02604 I
FVEG_01300 Fusarium verticillioides FVEG_01300 I
GGTG_04163 Gaeumannomyces graminis GGTG_04163 I
GLRG_04053 Colletotrichum graminicola GLRG_04053 I
HMPREF1624_03694 Sporothrix schenckii HMPREF1624_03694 I
MAC_04202 Metarhizium acridum MAC_04202 I
MAJ_02156 Metarhizium majus MAJ_02156 I
MAM_07644 Metarhizium album MAM_07644 I
MANI_024675 Metarhizium anisopliae MANI_024675 I