eomesb (Gasterosteus aculeatus)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSGACG00000006345 T339908_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EOMES
M03563_2.00 		Homo sapiens
DAGGTGTGAWNNN
NNNWTCACACCTH		 SELEX
Jolma et al.(2013)
EOMES_1 		0.866 0.902
EOMES
M03564_2.00 		Homo sapiens
TVACACNTNNNDRNGTGTGA
TCACACNYHNNNANGTGTBA		 SELEX
Jolma et al.(2013)
EOMES_2 		0.866 0.902
EOMES
M02752_2.00 		Homo sapiens
AGGTGTGAW
WTCACACCT		 SELEX
Jolma et al.(2010)
EOMES_monomer 		0.866 0.902
EOMES
M05807_2.00 		Homo sapiens
DAGGTGTGAN
NTCACACCTH		 SELEX
Yin et al.(2017)
EOMES_eDBD_HT-SELEX 		0.866 0.902
EOMES
M09647_2.00 		Homo sapiens
ARGTGWKAAN
NTTMWCACYT		 Misc
Heinz et al.(2010)
H9-Eomes_GSE26097 		0.866 0.902
EOMES
M05808_2.00 		Homo sapiens
NABGTGYKAH
DTMRCACVTN		 SELEX
Yin et al.(2017)
EOMES_eDBD_Methyl-HT-SELEX 		0.866 0.902
Eomes
M00215_2.00 		Mus musculus
RDGTGYBANN
NNTVRCACHY		 PBM
Badis et al.(2009)
Eomes_0921 		0.866 0.896
Tbr1
M01028_2.00 		Mus musculus
DTVRCAMNYH
DRNKTGYBAH		 PBM
SebePedros et al.(2013)
pTH2659 		0.846 0.847
TBR1
M03560_2.00 		Homo sapiens
AGGTGTGAAN
NTTCACACCT		 SELEX
Jolma et al.(2013)
TBR1_1 		0.846 0.847
TBR1
M03561_2.00 		Homo sapiens
RAGGTGTGAAH
DTTCACACCTY		 SELEX
Jolma et al.(2013)
TBR1_2 		0.846 0.847
TBX21
M03546_2.00 		Homo sapiens
GGTGTGAHDTMACACY
RGTGTKAHDTCACACC		 SELEX
Jolma et al.(2013)
TBX21_1 		0.767 0.716
TBX21
M03547_2.00 		Homo sapiens
DAGGTGTGAW
WTCACACCTH		 SELEX
Jolma et al.(2013)
TBX21_2 		0.767 0.716
TBX21
M03548_2.00 		Homo sapiens
TMACACYTNNDAGGTGTGA
TCACACCTHNNARGTGTKA		 SELEX
Jolma et al.(2013)
TBX21_3 		0.767 0.716
TBX21
M03549_2.00 		Homo sapiens
GGTGTGAWATCACACC
GGTGTGATWTCACACC		 SELEX
Jolma et al.(2013)
TBX21_4 		0.767 0.716
TBX21
M03550_2.00 		Homo sapiens
DAGGTGTGAW
WTCACACCTH		 SELEX
Jolma et al.(2013)
TBX21_5 		0.767 0.716
TBX21
M03551_2.00 		Homo sapiens
TSACACCWNMRAGGTGTGA
TCACACCTYKNWGGTGTSA		 SELEX
Jolma et al.(2013)
TBX21_6 		0.767 0.716
TBX21
M05793_2.00 		Homo sapiens
DAGGTGTKAN
NTMACACCTH		 SELEX
Yin et al.(2017)
TBX21_eDBD_HT-SELEX 		0.767 0.716
TBX21
M09425_2.00 		Homo sapiens
NDSDRGSTGWBRN
NYVWCASCYHSHN		 Misc
Kulakovskiy et al.(2013)
TBX21_HUMAN.H11MO.0.A 		0.767 0.716
Tbx21
M09428_2.00 		Mus musculus
DNDDSTGWSDND
HNHSWCASHHNH		 Misc
Kulakovskiy et al.(2013)
TBX21_MOUSE.H11MO.0.A 		0.767 0.716
Tbx21
M09648_2.00 		Mus musculus
ADGTGWSAHN
NDTSWCACHT		 Misc
Heinz et al.(2010)
CD8-Tbet_GSE33802 		0.767 0.716
TBX21
M05794_2.00 		Homo sapiens
DASGTGTKAW
WTMACACSTH		 SELEX
Yin et al.(2017)
TBX21_eDBD_Methyl-HT-SELEX 		0.767 0.716
A0A075Q982_PATMI
M00734_2.00 		Patiria miniata
NAGGTGTBAN
NTVACACCTN		 PBM
Cheatle-Jarvela et al.(2014)
PmTbr 		0.754 0.628
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000008399 T-box 148 335

Links

Other T-box family TFs
Other Gasterosteus aculeatus TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G045748 Zea mays GRMZM2G045748 I
GRMZM2G056407 Zea mays GRMZM2G056407 I
ORGLA03G0099100 Oryza glaberrima ORGLA03G0099100 N
orange1.1g037952m.g Citrus sinensis orange1.1g037952m.g N
Ciclev10013266m.g Citrus clementina Ciclev10013266m.g N
cassava2660.m1 Manihot esculenta cassava2660.m1 N
30147.m013953 Ricinus communis 30147.m013953 N
TRIUR3_28659 Triticum urartu TRIUR3_28659 N
Traes_7AS_ED6E0EE34 Triticum aestivum Traes_7AS_ED6E0EE34 N
Traes_3AS_7CF26C995 Triticum aestivum Traes_3AS_7CF26C995 N
Traes_2DL_27DDC281B Triticum aestivum Traes_2DL_27DDC281B N
PRUPE_ppa017959mg Prunus persica PRUPE_ppa017959mg N
ORUFI11G18060 Oryza rufipogon ORUFI11G18060 N
ORUFI03G10510 Oryza rufipogon ORUFI03G10510 N
ORGLA12G0007400 Oryza glaberrima ORGLA12G0007400 N
ORGLA05G0203100 Oryza glaberrima ORGLA05G0203100 N
BGIOSGA017070 Oryza indica BGIOSGA017070 N
OLONG_008119 Oryza longistaminata OLONG_008119 N
OB10G14410 Oryza brachyantha OB10G14410 N
GLYMA20G11094 Glycine max GLYMA20G11094 N
GLYMA17G12820 Glycine max GLYMA17G12820 N
GLYMA16G22488 Glycine max GLYMA16G22488 N
GLYMA15G19931 Glycine max GLYMA15G19931 N
Bo6g109080 Brassica oleracea Bo6g109080 N
Bo5g007300 Brassica oleracea Bo5g007300 N
BGIOSGA036890 Oryza indica BGIOSGA036890 N
BGIOSGA025705 Oryza indica BGIOSGA025705 N