tbx20 (Gasterosteus aculeatus)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSGACG00000012706 T339913_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbx20
M00835_2.00 		Mus musculus
NRRGTGTBAN
NTVACACYYN		 PBM
Weirauch et al.(2013)
pTH3777 		0.907 0.967
Tbx20
M09430_2.00 		Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN		 Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C 		0.907 0.967
Tbx20
M09650_2.00 		Mus musculus
SCTGTCADCASN
NSTGHTGACAGS		 Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636 		0.907 0.967
TBX20
M03565_2.00 		Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_1 		0.907 0.962
TBX20
M03566_2.00 		Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT		 SELEX
Jolma et al.(2013)
TBX20_2 		0.907 0.962
TBX20
M03567_2.00 		Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN		 SELEX
Jolma et al.(2013)
TBX20_3 		0.907 0.962
TBX20
M03568_2.00 		Homo sapiens
DAGGTGTGAWR
YWTCACACCTH		 SELEX
Jolma et al.(2013)
TBX20_4 		0.907 0.962
TBX20
M03569_2.00 		Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_5 		0.907 0.962
TBX20
M05813_2.00 		Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1 		0.907 0.962
TBX20
M05814_2.00 		Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2 		0.907 0.962
TBX20
M05817_2.00 		Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1 		0.907 0.962
TBX20
M05818_2.00 		Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2 		0.907 0.962
TBX20
M11385_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX20_05 		0.907 0.962
TBX20
M05815_2.00 		Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1 		0.907 0.962
TBX20
M05816_2.00 		Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2 		0.907 0.962
TBX20
M05819_2.00 		Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1 		0.907 0.962
TBX20
M05820_2.00 		Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2 		0.907 0.962
mid
M03994_2.00 		Drosophila melanogaster
DAGGTGTKAN
NTMACACCTH		 SELEX
Nitta et al.(2015)
mid_1 		0.792 0.720
XP_001195863
M02498_2.00 		Strongylocentrotus purpuratus
AGGTGTBA
TVACACCT		 PBM
Weirauch et al.(2014)
pTH9340 		0.770 0.659
Tbx5
M00833_2.00 		Mus musculus
AGGTGTBA
TVACACCT		 PBM
Weirauch et al.(2013)
pTH3775 		0.744 0.604
TBX5
M03552_2.00 		Homo sapiens
AGGTGTBA
TVACACCT		 SELEX
Jolma et al.(2013)
TBX5_1 		0.744 0.604
TBX5
M03553_2.00 		Homo sapiens
AGGTGTKANWWNTVACACCT
AGGTGTBANWWNTMACACCT		 SELEX
Jolma et al.(2013)
TBX5_2 		0.744 0.604
Tbx5
M09649_2.00 		Mus musculus
AGGTGHBA
TVDCACCT		 Misc
Heinz et al.(2010)
HL1-Tbx5.biotin_GSE21529 		0.744 0.604
TBX5
M11374_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_01 		0.744 0.604
TBX5
M11375_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_02 		0.744 0.604
Tbx5
M11387_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_05 		0.744 0.604
TBX5
M11376_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_Q2 		0.744 0.604
TBX5
M11377_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_Q5 		0.744 0.604
TBX18
M05797_2.00 		Homo sapiens
DDAGGTGTGARV
BYTCACACCTHH		 SELEX
Yin et al.(2017)
TBX18_eDBD_HT-SELEX 		0.742 0.648
TBX18
M11380_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX18_01 		0.742 0.648
TBX18
M05798_2.00 		Homo sapiens
NDAGGYGTGAAN
NTTCACRCCTHN		 SELEX
Yin et al.(2017)
TBX18_eDBD_Methyl-HT-SELEX 		0.742 0.648
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000016797 T-box 98 284

Links

Other T-box family TFs
Other Gasterosteus aculeatus TFs

276 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DUX3_HUMAN Homo sapiens DUX3_HUMAN D
DUX1_HUMAN Homo sapiens DUX1_HUMAN D
DUX4 Homo sapiens ENSG00000260596 D
NEMVEDRAFT_v1g92500 Nematostella vectensis NEMVEDRAFT_v1g92500 I
NEMVEDRAFT_v1g92436 Nematostella vectensis NEMVEDRAFT_v1g92436 I
NEMVEDRAFT_v1g38792 Nematostella vectensis NEMVEDRAFT_v1g38792 I
ENSTSYG00000019556 Tarsius syrichta ENSTSYG00000019556 I
ENSTSYG00000019549 Tarsius syrichta ENSTSYG00000019549 I
ENSTSYG00000019463 Tarsius syrichta ENSTSYG00000019463 I
ENSTSYG00000019459 Tarsius syrichta ENSTSYG00000019459 I
ENSTSYG00000019450 Tarsius syrichta ENSTSYG00000019450 I
ENSTSYG00000019440 Tarsius syrichta ENSTSYG00000019440 I
ENSTSYG00000013427 Tarsius syrichta ENSTSYG00000013427 I
ENSTSYG00000006219 Tarsius syrichta ENSTSYG00000006219 I
ENSPPYG00000015280 Pongo abelii ENSPPYG00000015280 I
ENSPANG00000023553 Papio anubis ENSPANG00000023553 I
ENSOARG00000010766 Ovis aries ENSOARG00000010766 I
ENSNLEG00000018797 Nomascus leucogenys ENSNLEG00000018797 I
ENSNLEG00000016146 Nomascus leucogenys ENSNLEG00000016146 I
ENSMMUG00000017616 Macaca mulatta ENSMMUG00000017616 I
ENSMMUG00000016525 Macaca mulatta ENSMMUG00000016525 I
ENSMMUG00000014712 Macaca mulatta ENSMMUG00000014712 I
ENSMICG00000015060 Microcebus murinus ENSMICG00000015060 I
ENSMICG00000006881 Microcebus murinus ENSMICG00000006881 I
ENSGGOG00000023520 Gorilla gorilla ENSGGOG00000023520 I
ENSGGOG00000013031 Gorilla gorilla ENSGGOG00000013031 I
ENSDNOG00000041460 Dasypus novemcinctus ENSDNOG00000041460 I
ENSDNOG00000033746 Dasypus novemcinctus ENSDNOG00000033746 I
ENSCSAG00000019478 Chlorocebus sabaeus ENSCSAG00000019478 I
ENSCJAG00000023408 Callithrix jacchus ENSCJAG00000023408 I