AACERI_AaceriAGR134W (Saccharomycetaceae sp ashbya aceri)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 AACERI_AaceriAGR134W T342098_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.988 0.988
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.988 0.988
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.988 0.988
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.808 0.808
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.808 0.808
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.808 0.808
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.808 0.808
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.808 0.808
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.808 0.808
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.808 0.808
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.808 0.808
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.808 0.808
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.808 0.808
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AGO13992 TBP 63 145
AGO13992 TBP 153 236

Links

Other TBP family TFs
Other Saccharomycetaceae sp ashbya aceri TFs

750 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ERF3 Arabidopsis thaliana AT1G50640 D
ERF9 Arabidopsis thaliana AT5G44210 D
OS05G0497200 Oryza sativa OS05G0497200 D
PK17878.1 Cannabis sativa PK17878.1 D
AMTR_s00002p00264660 Amborella trichopoda AMTR_s00002p00264660 I
ERF12 Arabidopsis thaliana AT1G28360 I
BGIOSGA017797 Oryza indica BGIOSGA017797 I
Bo3g143340 Brassica oleracea Bo3g143340 I
Bo5g055840 Brassica oleracea Bo5g055840 I
Bo7g048190 Brassica oleracea Bo7g048190 I
Bra010881 Brassica rapa Bra010881 I
Bra015266 Brassica rapa Bra015266 I
Bra030094 Brassica rapa Bra030094 I
Bra032898 Brassica rapa Bra032898 I
BRADI2G52380 Brachypodium distachyon BRADI2G52380 I
ERF12 Arabidopsis lyrata fgenesh2_kg.1__3004__AT1G28360.1 I
ERF3 Arabidopsis lyrata fgenesh2_kg.1__4150__AT1G50640.1 I
ERF9 Arabidopsis lyrata fgenesh2_kg.8__388__AT5G44210.1 I
GLYMA03G31640 Glycine max GLYMA03G31640 I
GLYMA13G31010 Glycine max GLYMA13G31010 I
GLYMA15G08360 Glycine max GLYMA15G08360 I
GRMZM2G002119 Zea mays GRMZM2G002119 I
GRMZM2G066158 Zea mays GRMZM2G066158 I
GSMUA_Achr3G29290_001 Musa acuminata GSMUA_Achr3G29290_001 I
GSMUA_Achr4G06660_001 Musa acuminata GSMUA_Achr4G06660_001 I
GSMUA_Achr5G09940_001 Musa acuminata GSMUA_Achr5G09940_001 I
GSMUA_Achr6G00240_001 Musa acuminata GSMUA_Achr6G00240_001 I
GSMUA_Achr6G01440_001 Musa acuminata GSMUA_Achr6G01440_001 I
GSMUA_Achr8G15820_001 Musa acuminata GSMUA_Achr8G15820_001 I
GSMUA_AchrUn_randomG06910_001 Musa acuminata GSMUA_AchrUn_randomG06910_001 I
LPERR05G17470 Leersia perrieri LPERR05G17470 I
MLOC_66843 Hordeum vulgare MLOC_66843 I
MTR_2g014300 Medicago truncatula MTR_2g014300 I
OGLUM05G22780 Oryza glumaepatula OGLUM05G22780 I
OMERI05G19480 Oryza meridionalis OMERI05G19480 I
ONIVA05G22260 Oryza nivara ONIVA05G22260 I
OPUNC05G19220 Oryza punctata OPUNC05G19220 I
ORGLA05G0187500 Oryza glaberrima ORGLA05G0187500 I
ORUFI05G22840 Oryza rufipogon ORUFI05G22840 I
PGSC0003DMG400013744 Solanum tuberosum PGSC0003DMG400013744 I
PGSC0003DMG400022823 Solanum tuberosum PGSC0003DMG400022823 I
PGSC0003DMG400029713 Solanum tuberosum PGSC0003DMG400029713 I
POPTR_0001s36610 Populus trichocarpa POPTR_0001s36610 I
POPTR_0002s04430 Populus trichocarpa POPTR_0002s04430 I
POPTR_0004s04700 Populus trichocarpa POPTR_0004s04700 I
POPTR_0005s24110 Populus trichocarpa POPTR_0005s24110 I
POPTR_0007s01110 Populus trichocarpa POPTR_0007s01110 I
POPTR_0011s05570 Populus trichocarpa POPTR_0011s05570 I
POPTR_0017s04540 Populus trichocarpa POPTR_0017s04540 I
PRUPE_ppa010090mg Prunus persica PRUPE_ppa010090mg I
PRUPE_ppa012385mg Prunus persica PRUPE_ppa012385mg I
PRUPE_ppa022435mg Prunus persica PRUPE_ppa022435mg I
Q84LQ6_SOLLC Solanum lycopersicum Q84LQ6_SOLLC I
Q84XB1_SOLLC Solanum lycopersicum Q84XB1_SOLLC I
Sb03g037085 Sorghum bicolor Sb03g037085 I
SELMODRAFT_19889 Selaginella moellendorffii SELMODRAFT_19889 I
SELMODRAFT_430375 Selaginella moellendorffii SELMODRAFT_430375 I
SELMODRAFT_443461 Selaginella moellendorffii SELMODRAFT_443461 I
SELMODRAFT_49950 Selaginella moellendorffii SELMODRAFT_49950 I
SELMODRAFT_59974 Selaginella moellendorffii SELMODRAFT_59974 I
SELMODRAFT_72880 Selaginella moellendorffii SELMODRAFT_72880 I
SELMODRAFT_73142 Selaginella moellendorffii SELMODRAFT_73142 I
SELMODRAFT_73144 Selaginella moellendorffii SELMODRAFT_73144 I
Si003053m.g Setaria italica Si003053m.g I
Si024479m.g Setaria italica Si024479m.g I
Solyc02g077840.1 Solanum lycopersicum Solyc02g077840.1 I
Solyc10g009110.1 Solanum lycopersicum Solyc10g009110.1 I
TCM_029823 Theobroma cacao TCM_029823 I
TCM_030804 Theobroma cacao TCM_030804 I
TRAES3BF075600040CFD_g Triticum aestivum TRAES3BF075600040CFD_g I
VIT_07s0141g00690 Vitis vinifera VIT_07s0141g00690 I
ERF12 Vitis vinifera VIT_10s0003g00130 I
VIT_14s0081g00520 Vitis vinifera VIT_14s0081g00520 I
VIT_19s0090g01080 Vitis vinifera VIT_19s0090g01080 I
Ca_00326 Cicer arietinum Ca_00326 I
Ca_12205 Cicer arietinum Ca_12205 I
Cla013723 Citrullus lanatus Cla013723 I
Cla020002 Citrullus lanatus Cla020002 I
Pm010083 Prunus mume Pm010083 I
Pm020210 Prunus mume Pm020210 I
29983.m003147 Ricinus communis 29983.m003147 I
30190.m011323 Ricinus communis 30190.m011323 I
cassava42971.valid.m1 Manihot esculenta cassava42971.valid.m1 I
cassava4486.m1 Manihot esculenta cassava4486.m1 I
cassava46560.m1 Manihot esculenta cassava46560.m1 I
Cucsa.126860 Cucumis sativus Cucsa.126860 I
Cucsa.139820 Cucumis sativus Cucsa.139820 I
e_gw1.124.59.1 Physcomitrella patens e_gw1.124.59.1 I
e_gw1.487.2.1 Physcomitrella patens e_gw1.487.2.1 I
estExt_gwp_gw1.C_1270048 Physcomitrella patens estExt_gwp_gw1.C_1270048 I
gw1.90.191.1 Physcomitrella patens gw1.90.191.1 I
mgf023367m Mimulus guttatus mgf023367m I
Aquca_017_00628 Aquilegia coerulea Aquca_017_00628 I
Aquca_036_00073 Aquilegia coerulea Aquca_036_00073 I
Bostr.15697s0156 Boechera stricta Bostr.15697s0156 I
Bostr.26675s0113 Boechera stricta Bostr.26675s0113 I
Bostr.3148s0037 Boechera stricta Bostr.3148s0037 I
Cagra.0381s0006 Capsella grandiflora Cagra.0381s0006 I
Cagra.0952s0001 Capsella grandiflora Cagra.0952s0001 I
Cagra.1822s0023 Capsella grandiflora Cagra.1822s0023 I
Carubv10010284m.g Capsella rubella Carubv10010284m.g I
Carubv10011585m.g Capsella rubella Carubv10011585m.g I
Carubv10027246m.g Capsella rubella Carubv10027246m.g I
Ciclev10016982m.g Citrus clementina Ciclev10016982m.g I
evm.TU.supercontig_27.18 Carica papaya evm.TU.supercontig_27.18 I
evm.TU.supercontig_83.80 Carica papaya evm.TU.supercontig_83.80 I
gene21403-v1.0-hybrid Fragaria vesca gene21403-v1.0-hybrid I
gene29735-v1.0-hybrid Fragaria vesca gene29735-v1.0-hybrid I
Gorai.002G092900 Gossypium raimondii Gorai.002G092900 I
Gorai.009G443400 Gossypium raimondii Gorai.009G443400 I
Gorai.011G029700 Gossypium raimondii Gorai.011G029700 I
Lus10039857.g Linum usitatissimum Lus10039857.g I
MDP0000236605 Malus domestica MDP0000236605 I
MDP0000310904 Malus domestica MDP0000310904 I
MDP0000457509 Malus domestica MDP0000457509 I
orange1.1g030994m.g Citrus sinensis orange1.1g030994m.g I
Pavir.Ea03148 Panicum virgatum Pavir.Ea03148 I
Pavir.Eb03165 Panicum virgatum Pavir.Eb03165 I
Pavir.J36215 Panicum virgatum Pavir.J36215 I
SapurV1A.0012s0570 Salix purpurea SapurV1A.0012s0570 I
SapurV1A.0032s0450 Salix purpurea SapurV1A.0032s0450 I
SapurV1A.0118s0170 Salix purpurea SapurV1A.0118s0170 I
SapurV1A.2062s0030 Salix purpurea SapurV1A.2062s0030 I
Thhalv10009947m.g Eutrema salsugineum Thhalv10009947m.g I
Thhalv10011689m.g Eutrema salsugineum Thhalv10011689m.g I
PK02998.1 Cannabis sativa PK02998.1 I
chr1.CM0375.170.nd Lotus japonicus chr1.CM0375.170.nd I
chr6.CM0114.130.nc Lotus japonicus chr6.CM0114.130.nc I