AMTR_s00047p00131170 (Amborella trichopoda)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 AMTR_s00047p00131170 T342126_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.863 0.863
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.863 0.863
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.863 0.863
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.811 0.811
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.811 0.811
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.811 0.811
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.811 0.811
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.811 0.811
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.811 0.811
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.811 0.811
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.811 0.811
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.811 0.811
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.811 0.811
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN17772 TBP 3 31
ERN17772 TBP 39 104

Links

Other TBP family TFs
Other Amborella trichopoda TFs

503 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCU04663 Neurospora crassa NCU04663 D
NechaG40581 Fusarium solani NechaG40581 I
PV07_06437 Cladophialophora immunda PV07_06437 I
PMAA_070340 Talaromyces marneffei PMAA_070340 I
PITC_041810 Penicillium italicum PITC_041810 I
PFICI_07122 Pestalotiopsis fici PFICI_07122 I
PEX1_083360 Penicillium expansum PEX1_083360 I
PDIP_85460 Penicillium digitatum PDIP_85460 I
PDE_04102 Penicillium oxalicum PDE_04102 I
PABG_04642 Paracoccidioides brasiliensis PABG_04642 I
OIDMADRAFT_112327 Oidiodendron maius OIDMADRAFT_112327 I
PVAR5_8925 Byssochlamys spectabilis PVAR5_8925 I
MGYG_00861 Microsporum gypseum MGYG_00861 I
MGU_05623 Metarhizium guizhouense MGU_05623 I
MCYG_00297 Arthroderma otae MCYG_00297 I
MBR_04335 Metarhizium brunneum MBR_04335 I
MBM_05016 Marssonina brunnea MBM_05016 I
MAM_05041 Metarhizium album MAM_05041 I
MAJ_05180 Metarhizium majus MAJ_05180 I
MAC_03900 Metarhizium acridum MAC_03900 I
TRIREDRAFT_49372 Trichoderma reesei TRIREDRAFT_49372 I
PMAA_070340 Penicillium marneffei PMAA_070340 I
estExt_fgenesh3_pm.C_140174 Neurospora discreta estExt_fgenesh3_pm.C_140174 I
e_gw1.5.1042.1 Nectria haematococca e_gw1.5.1042.1 I
VHEMI00437 Torrubiella hemipterigena VHEMI00437 I
UV8b_4097 Ustilaginoidea virens UV8b_4097 I
U727_0043004001 Penicillium solitum U727_0043004001 I
TSTA_090670 Talaromyces stipitatus TSTA_090670 I
TRIVIDRAFT_122714 Trichoderma virens TRIVIDRAFT_122714 I
MGG_09263 Magnaporthe oryzae MGG_09263 I
TRIATDRAFT_161814 Trichoderma atroviride TRIATDRAFT_161814 I
THITE_40970 Thielavia terrestris THITE_40970 I
TESG_02247 Trichophyton tonsurans TESG_02247 I
TEQG_02692 Trichophyton equinum TEQG_02692 I
SS1G_05371 Sclerotinia sclerotiorum SS1G_05371 I
SMAC_08342 Sordaria macrospora SMAC_08342 I
SBOR_3621 Sclerotinia borealis SBOR_3621 I
S40288_07421 Stachybotrys chartarum S40288_07421 I
ANIA_05849 Aspergillus nidulans CADANIAG00007192 I
CPUR_01702 Claviceps purpurea CPUR_01702 I
Cob_02185 Colletotrichum orbiculare Cob_02185 I
CHGG_00505 Chaetomium globosum CHGG_00505 I
NFIA_083690 Neosartorya fischeri CADNFIAG00006940 I
HCBG_04625 Histoplasma capsulatum HCBG_04625 I
A1O9_03542 Exophiala aquamarina A1O9_03542 I
NFIA_024310 Neosartorya fischeri CADNFIAG00002261 I
CADAORAG00005589 Aspergillus oryzae CADAORAG00005589 I
MCYG_00297 Microsporum canis MCYG_00297 I
AFUA_2G08040 Aspergillus fumigatus CADAFUAG00004446 I
ACLA_079920 Aspergillus clavatus CADACLAG00007683 I
BGHDH14_bgh01821 Blumeria graminis BGHDH14_bgh01821 I
BDDG_04796 Blastomyces dermatitidis BDDG_04796 I
Bcin09g02560 Botrytis cinerea Bcin09g02560 I
BBA_08191 Beauveria bassiana BBA_08191 I
A1O9_13001 Exophiala aquamarina A1O9_13001 I
ACRE_088710 Acremonium chrysogenum ACRE_088710 I
EURHEDRAFT_513914 Aspergillus ruber EURHEDRAFT_513914 I
H101_07435 Trichophyton interdigitale H101_07435 I
H072_8333 Dactylellina haptotyla H072_8333 I
GSTUM_00005598001 Tuber melanosporum GSTUM_00005598001 I
FVEG_02723 Fusarium verticillioides FVEG_02723 I
FPSE_00499 Fusarium pseudograminearum FPSE_00499 I
FOXG_14277 Fusarium oxysporum FOXG_14277 I
FOXG_05408 Fusarium oxysporum FOXG_05408 I
FGRRES_17309 Fusarium graminearum FGRRES_17309 I
FFUJ_07449 Fusarium fujikuroi FFUJ_07449 I
EV44_g6283 Erysiphe necator EV44_g6283 I
A1O3_03291 Capronia epimyces A1O3_03291 I
DRE_04286 Drechslerella stenobrocha DRE_04286 I
A1O7_03671 Cladophialophora yegresii A1O7_03671 N
Pc22g26430 Penicillium chrysogenum Pc22g26430 N
Z517_10110 Fonsecaea pedrosoi Z517_10110 N
UREG_00865 Uncinocarpus reesii UREG_00865 N
Pc24g00780 Penicillium chrysogenum Pc24g00780 N
Z519_00024 Cladophialophora bantiana Z519_00024 N
A1O1_08282 Capronia coronata A1O1_08282 N
Pc24g01310 Penicillium chrysogenum Pc24g01310 N
A1O5_00025 Cladophialophora psammophila A1O5_00025 N
PV10_05308 Exophiala mesophila PV10_05308 N
AOL_s00083g362 Arthrobotrys oligospora AOL_s00083g362 N
CADANGAG00007493 Aspergillus niger CADANGAG00007493 N
PV11_00815 Exophiala sideris PV11_00815 N
PV08_04106 Exophiala spinifera PV08_04106 N
PV06_00266 Exophiala oligosperma PV06_00266 N
PV04_03866 Capronia semiimmersa PV04_03866 N
CPC735_054240 Coccidioides posadasii CPC735_054240 N
PCH_Pc24g01310 Penicillium rubens PCH_Pc24g01310 N
PCH_Pc24g00780 Penicillium rubens PCH_Pc24g00780 N
PCH_Pc22g26430 Penicillium rubens PCH_Pc22g26430 N
CIMG_00917 Coccidioides immitis CIMG_00917 N
G647_04707 Cladophialophora carrionii G647_04707 N
HMPREF1120_05352 Exophiala dermatitidis HMPREF1120_05352 N