COCCADRAFT_85362 (Bipolaris zeicola)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 COCCADRAFT_85362 T342218_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.898 0.898
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.898 0.898
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.898 0.898
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.814 0.814
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.814 0.814
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.814 0.814
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.814 0.814
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.814 0.814
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.814 0.814
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.814 0.814
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.814 0.814
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.814 0.814
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.814 0.814
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EUC37543 TBP 73 155
EUC37543 TBP 163 246

Links

Other TBP family TFs
Other Bipolaris zeicola TFs

760 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J12143 Panicum virgatum Pavir.J12143 I
GLYMA14G09231 Glycine max GLYMA14G09231 I
Pavir.Ca01237 Panicum virgatum Pavir.Ca01237 I
OGLUM03G27730 Oryza glumaepatula OGLUM03G27730 I
OGLUM05G02640 Oryza glumaepatula OGLUM05G02640 I
OMERI05G02570 Oryza meridionalis OMERI05G02570 I
OLONG_013198 Oryza longistaminata OLONG_013198 I
Traes_6AS_E0A257EEA Triticum aestivum Traes_6AS_E0A257EEA N
OPUNC09G08950 Oryza punctata OPUNC09G08950 N
TRIUR3_21181 Triticum urartu TRIUR3_21181 N
TRIUR3_26354 Triticum urartu TRIUR3_26354 N
TRIUR3_33471 Triticum urartu TRIUR3_33471 N
Pm005303 Prunus mume Pm005303 N
Cucsa.140430 Cucumis sativus Cucsa.140430 N
mgf017216m Mimulus guttatus mgf017216m N
mgf025738m Mimulus guttatus mgf025738m N
Lus10018724.g Linum usitatissimum Lus10018724.g N
Lus10036286.g Linum usitatissimum Lus10036286.g N
MDP0000293310 Malus domestica MDP0000293310 N
PDK_20s1361701g002 Phoenix dactylifera PDK_20s1361701g002 N
ORUFI10G19390 Oryza rufipogon ORUFI10G19390 N
ORGLA05G0025000 Oryza glaberrima ORGLA05G0025000 N
BGIOSGA009202 Oryza indica BGIOSGA009202 N
OPUNC01G09800 Oryza punctata OPUNC01G09800 N
ONIVA10G20730 Oryza nivara ONIVA10G20730 N
OLONG_008235 Oryza longistaminata OLONG_008235 N
OLONG_003839 Oryza longistaminata OLONG_003839 N
OBART02G35840 Oryza barthii OBART02G35840 N
OB12G25120 Oryza brachyantha OB12G25120 N
OB02G42630 Oryza brachyantha OB02G42630 N
GSMUA_Achr9G11300_001 Musa acuminata GSMUA_Achr9G11300_001 N
GRMZM2G316758 Zea mays GRMZM2G316758 N
F775_20324 Aegilops tauschii F775_20324 N
Bo9g001070 Brassica oleracea Bo9g001070 N