CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MPH_02732
(
Macrophomina phaseolina
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00352 (TBP)
IPR000814
MPH_02732
T342719_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SPT15
M01567_2.00
Saccharomyces cerevisiae
NNDWDAW
WTHWHNN
PBM
Zhu et al.(2009)
Spt15
0.922
0.922
SPT15
M08609_2.00
Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN
Misc
DeBoer et al.(2011)
YER148W_798
0.922
0.922
SPT15
M11393_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$TBP_Q6
0.922
0.922
Tbp
M00216_2.00
Mus musculus
NWWWWAW
WTWWWWN
PBM
Badis et al.(2009)
Tbp_pr781
0.820
0.820
TBP
M08231_2.00
Homo sapiens
YATTTGCATD
HATGCAAATR
ChIP-seq
Contrino et al.(2012)
Mv129
0.820
0.820
TBP
M09432_2.00
Homo sapiens
MTATAWAWRS
SYWTWTATAK
Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A
0.820
0.820
Tbp
M09433_2.00
Mus musculus
VTATAAAARS
SYTTTTATAB
Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A
0.820
0.820
TBP
M11388_2.00
Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB
Transfac
Matys et al.(2006)
V$TATA_01
0.820
0.820
TBP
M11389_2.00
Homo sapiens
NCYWTAAAAD
HTTTTAWRGN
Transfac
Matys et al.(2006)
V$TATA_C
0.820
0.820
TBP
M11390_2.00
Homo sapiens
KATAAATW
WATTTATM
Transfac
Matys et al.(2006)
V$TBP_01
0.820
0.820
TBP
M11391_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6_01
0.820
0.820
TBP
M11392_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6
0.820
0.820
TBP
M11491_2.00
Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB
Unknown
Mathelier et al.(2014)
MA0108.2
0.820
0.820
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EKG20002
TBP
74
156
VPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKL
EKG20002
TBP
164
247
DFKIQNIVGSCDIKFPIRLEGLASRHHNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDF
Links
Other
TBP
family TFs
Other
Macrophomina phaseolina
TFs
751 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPPG_03931
Spizellomyces punctatus
SPPG_03931
I
KNAG_0A05600
Kazachstania naganishii
KNAG_0A05600
I
SCHCODRAFT_238623
Schizophyllum commune
SCHCODRAFT_238623
I
PLEOSDRAFT_1075550
Pleurotus ostreatus
PLEOSDRAFT_1075550
I
FIBRA_04336
Fibroporia radiculosa
FIBRA_04336
I
K443DRAFT_105165
Laccaria amethystina
K443DRAFT_105165
I
PISMIDRAFT_671894
Pisolithus microcarpus
PISMIDRAFT_671894
N
M407DRAFT_128179
Tulasnella calospora
M407DRAFT_128179
N
M413DRAFT_6767
Hebeloma cylindrosporum
M413DRAFT_6767
N
PAXRUDRAFT_824657
Paxillus rubicundulus
PAXRUDRAFT_824657
N
PHACADRAFT_204947
Phanerochaete carnosa
PHACADRAFT_204947
N
PHLGIDRAFT_50338
Phlebiopsis gigantea
PHLGIDRAFT_50338
N
LACBIDRAFT_297628
Laccaria bicolor
LACBIDRAFT_297628
N
POSPLDRAFT_106191
Postia placenta
POSPLDRAFT_106191
N
SCLCIDRAFT_119671
Scleroderma citrinum
SCLCIDRAFT_119671
N
SERLA73DRAFT_78978
Serpula lacrymans
SERLA73DRAFT_78978
N
fgenesh1_pg.C_scaffold_18000074
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_18000074
N
M404DRAFT_137431
Pisolithus tinctorius
M404DRAFT_137431
N
M378DRAFT_174679
Amanita muscaria
M378DRAFT_174679
N
K443DRAFT_677749
Laccaria amethystina
K443DRAFT_677749
N
JAAARDRAFT_44019
Jaapia argillacea
JAAARDRAFT_44019
N
HETIRDRAFT_431289
Heterobasidion irregulare
HETIRDRAFT_431289
N
GLOTRDRAFT_134845
Gloeophyllum trabeum
GLOTRDRAFT_134845
N
GALMADRAFT_132473
Galerina marginata
GALMADRAFT_132473
N
CY34DRAFT_810493
Suillus luteus
CY34DRAFT_810493
N
CERSUDRAFT_110850
Ceriporiopsis subvermispora
CERSUDRAFT_110850
N
CC1G_00612
Coprinopsis cinerea
CC1G_00612
N
BOTBODRAFT_56815
Botryobasidium botryosum
BOTBODRAFT_56815
N
BN946_scf184867.g15
Trametes cinnabarina
BN946_scf184867.g15
N
AGABI2DRAFT_189288
Agaricus bisporus
AGABI2DRAFT_189288
N