SPAPADRAFT_58486 (Spathaspora passalidarum)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 SPAPADRAFT_58486 T342910_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.964 0.964
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.964 0.964
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.964 0.964
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.814 0.814
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.814 0.814
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.814 0.814
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.814 0.814
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.814 0.814
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.814 0.814
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.814 0.814
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.814 0.814
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.814 0.814
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.814 0.814
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EGW35270 TBP 70 152
EGW35270 TBP 160 243

Links

Other TBP family TFs
Other Spathaspora passalidarum TFs

782 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPRG_11849 Saprolegnia parasitica SPRG_11849 N
SPRG_14746 Saprolegnia parasitica SPRG_14746 N
ALNC14_092860 Albugo laibachii ALNC14_092860 N
F443_00152 Phytophthora parasitica F443_00152 N
F443_22431 Phytophthora parasitica F443_22431 N
HpaG809187 Hyaloperonospora arabidopsidis HpaG809187 N
maker-pag1_scaffold_223-fgenesh-gene-0.6 Pythium aphanidermatum maker-pag1_scaffold_223-fgenesh-gene-0.6 N
maker-pag1_scaffold_387-snap-gene-0.3 Pythium aphanidermatum maker-pag1_scaffold_387-snap-gene-0.3 N
maker-pir_contig_342-snap-gene-0.19 Pythium irregulare maker-pir_contig_342-snap-gene-0.19 N
maker-pir_contig_839-snap-gene-0.8 Pythium irregulare maker-pir_contig_839-snap-gene-0.8 N
maker-pve_contig_301-fgenesh-gene-0.3 Pythium vexans maker-pve_contig_301-fgenesh-gene-0.3 N
Phyra75979 Phytophthora ramorum Phyra75979 N
Phyra85854 Phytophthora ramorum Phyra85854 N
Physo128590 Phytophthora sojae Physo128590 N
e_gw1.8.191.1 Phytophthora capsici e_gw1.8.191.1 N
estExt_fgenesh1_kg.C_170712 Phytophthora capsici estExt_fgenesh1_kg.C_170712 N