e_gw1.5.392.1 (Chlorella NC64A)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00352 (TBP) IPR000814 e_gw1.5.392.1 T343109_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.802 0.802
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.802 0.802
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.802 0.802
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.802 0.802
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.802 0.802
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.802 0.802
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.802 0.802
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.802 0.802
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.802 0.802
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.802 0.802
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.790 0.790
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.790 0.790
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.790 0.790
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.5.392.1 TBP 28 110
e_gw1.5.392.1 TBP 118 201

Links

Other TBP family TFs
Other Chlorella NC64A TFs

732 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PV05_02773 Exophiala xenobiotica PV05_02773 I
GLOTRDRAFT_127900 Gloeophyllum trabeum GLOTRDRAFT_127900 I
estExt_fgeneshDP_pg.C_350041 Dictyostelium purpureum estExt_fgeneshDP_pg.C_350041 I
estExt_fgenesh1_kg.C_chr_160021 Mycosphaerella graminicola estExt_fgenesh1_kg.C_chr_160021 I
SERLA73DRAFT_72643 Serpula lacrymans SERLA73DRAFT_72643 I
SEPMUDRAFT_122411 Sphaerulina musiva SEPMUDRAFT_122411 I
JAAARDRAFT_47621 Jaapia argillacea JAAARDRAFT_47621 I
K443DRAFT_105165 Laccaria amethystina K443DRAFT_105165 I
SCHCODRAFT_257652 Schizophyllum commune SCHCODRAFT_257652 I
PV11_06012 Exophiala sideris PV11_06012 I
RO3G_04480 Rhizopus oryzae RO3G_04480 I
Mycgr3G106635 Zymoseptoria tritici Mycgr3G106635 I
NAPIS_ORF00325 Nosema apis NAPIS_ORF00325 I
NBO_6g0031 Nosema bombycis NBO_6g0031 I
NCER_100315 Nosema ceranae NCER_100315 I
PAXRUDRAFT_10369 Paxillus rubicundulus PAXRUDRAFT_10369 I
PHACADRAFT_257545 Phanerochaete carnosa PHACADRAFT_257545 I
PHACADRAFT_258345 Phanerochaete carnosa PHACADRAFT_258345 I
PHLGIDRAFT_184498 Phlebiopsis gigantea PHLGIDRAFT_184498 I
PHLGIDRAFT_55548 Phlebiopsis gigantea PHLGIDRAFT_55548 I
gw1.6.914.1 Mucor circinelloides gw1.6.914.1 I
SPPG_06166 Spizellomyces punctatus SPPG_06166 I
EFA86584.1 Polysphondylium pallidum EFA86584.1 I
BAUCODRAFT_120297 Baudoinia compniacensis BAUCODRAFT_120297 I
BN946_scf184983.g13 Trametes cinnabarina BN946_scf184983.g13 I
SPPG_03931 Spizellomyces punctatus SPPG_03931 I
RO3G_16317 Rhizopus oryzae RO3G_16317 I
RO3G_14851 Rhizopus oryzae RO3G_14851 I
BOTBODRAFT_25870 Botryobasidium botryosum BOTBODRAFT_25870 I
gw1.26.106.1 Phycomyces blakesleeanus gw1.26.106.1 I
RO3G_01863 Rhizopus oryzae RO3G_01863 I
gw1.16.189.1 Phycomyces blakesleeanus gw1.16.189.1 I
gw1.10.371.1 Mucor circinelloides gw1.10.371.1 I
warA Dictyostelium discoideum DDB_G0291075 I
FIBRA_03525 Fibroporia radiculosa FIBRA_03525 I
GLOINDRAFT_346743 Rhizophagus irregularis GLOINDRAFT_346743 I
FOMPIDRAFT_1031831 Fomitopsis pinicola FOMPIDRAFT_1031831 I
fgenesh1_pg.C_scaffold_15000074 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_15000074 I
EuGene3000454 Heterobasidion annosum EuGene3000454 N
PIIN_03963 Piriformospora indica PIIN_03963 N
PISMIDRAFT_217828 Pisolithus microcarpus PISMIDRAFT_217828 N
PISMIDRAFT_671894 Pisolithus microcarpus PISMIDRAFT_671894 N
PLEOSDRAFT_1112690 Pleurotus ostreatus PLEOSDRAFT_1112690 N
POSPLDRAFT_106191 Postia placenta POSPLDRAFT_106191 N
SCLCIDRAFT_119671 Scleroderma citrinum SCLCIDRAFT_119671 N
WALSEDRAFT_62198 Wallemia sebi WALSEDRAFT_62198 N
J056_002014 Wallemia ichthyophaga J056_002014 N
RO3G_11070 Rhizopus oryzae RO3G_11070 N
AGABI2DRAFT_192433 Agaricus bisporus AGABI2DRAFT_192433 N
BOTBODRAFT_56815 Botryobasidium botryosum BOTBODRAFT_56815 N
CC1G_01991 Coprinopsis cinerea CC1G_01991 N
CY34DRAFT_611334 Suillus luteus CY34DRAFT_611334 N
CY34DRAFT_810493 Suillus luteus CY34DRAFT_810493 N
GALMADRAFT_540101 Galerina marginata GALMADRAFT_540101 N
GLOTRDRAFT_134845 Gloeophyllum trabeum GLOTRDRAFT_134845 N
HETIRDRAFT_169178 Heterobasidion irregulare HETIRDRAFT_169178 N
HETIRDRAFT_431289 Heterobasidion irregulare HETIRDRAFT_431289 N
PAXRUDRAFT_823153 Paxillus rubicundulus PAXRUDRAFT_823153 N
JAAARDRAFT_44019 Jaapia argillacea JAAARDRAFT_44019 N
K443DRAFT_82097 Laccaria amethystina K443DRAFT_82097 N
LACBIDRAFT_297628 Laccaria bicolor LACBIDRAFT_297628 N
LACBIDRAFT_324166 Laccaria bicolor LACBIDRAFT_324166 N
M378DRAFT_12738 Amanita muscaria M378DRAFT_12738 N
M378DRAFT_174679 Amanita muscaria M378DRAFT_174679 N
M407DRAFT_128179 Tulasnella calospora M407DRAFT_128179 N
M413DRAFT_24511 Hebeloma cylindrosporum M413DRAFT_24511 N
Moror_6850 Moniliophthora roreri Moror_6850 N