BGIOSGA000770 (Oryza indica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 BGIOSGA000770 T343699_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.939 0.508
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.938 0.483
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.930 0.492
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.903 0.508
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.903 0.508
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.896 0.415
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.890 0.449
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.890 0.449
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.875 0.390
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.875 0.390
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.875 0.390
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.865 0.390
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.865 0.390
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.865 0.407
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.865 0.390
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.851 0.364
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA000770-PA TCP 54 171

Links

Other TCP family TFs
Other Oryza indica TFs

407 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF202 Homo sapiens ENSG00000166261 D 0.000
ENSOARG00000000770 Ovis aries ENSOARG00000000770 I 0.000
ENSP00000337724 Macaca fascicularis ENSP00000337724 I 0.000
ENSBTAP00000022184-D1 Bos grunniens ENSBTAP00000022184-D1 I 0.000
ZNF202 Vicugna pacos ENSVPAG00000004840 I 0.000
ZNF202 Tursiops truncatus ENSTTRG00000011530 I 0.000
ENSTSYG00000010154 Tarsius syrichta ENSTSYG00000010154 I 0.000
ZNF202 Tupaia belangeri ENSTBEG00000011372 I 0.000
ENSSTOG00000027536 Ictidomys tridecemlineatus ENSSTOG00000027536 I 0.000
ZNF202 Sus scrofa ENSSSCG00000015145 I 0.000
ZNF202 Pan troglodytes ENSPTRG00000004409 I 0.000
ENSPPYG00000003989 Pongo abelii ENSPPYG00000003989 I 0.000
ENSPANG00000004921 Papio anubis ENSPANG00000004921 I 0.000
ZNF202 Otolemur garnettii ENSOGAG00000026373 I 0.000
ZNF202 Oryctolagus cuniculus ENSOCUG00000014264 I 0.000
ENSAMEG00000008512 Ailuropoda melanoleuca ENSAMEG00000008512 I 0.000
ENSMPUG00000005930 Mustela putorius furo ENSMPUG00000005930 I 0.000
ZNF202 Monodelphis domestica ENSMODG00000012927 I 0.000
ZNF202 Macaca mulatta ENSMMUG00000010646 I 0.000
ZNF202 Microcebus murinus ENSMICG00000007659 I 0.000
ZNF202 Gorilla gorilla ENSGGOG00000006891 I 0.000
ZNF202 Equus caballus ENSECAG00000024393 I 0.000
ZNF202 Dasypus novemcinctus ENSDNOG00000031856 I 0.000
ENSCSAG00000002403 Chlorocebus sabaeus ENSCSAG00000002403 I 0.000
ZNF202 Callithrix jacchus ENSCJAG00000007782 I 0.000
ZNF202 Choloepus hoffmanni ENSCHOG00000007537 I 0.000
ZNF202 Canis familiaris ENSCAFG00000011509 I 0.000
ZNF202 Bos taurus ENSBTAG00000016684 I 0.000