BGIOSGA025162 (Oryza indica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 BGIOSGA025162 T343712_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP24
M02499_2.00 		Arabidopsis thaliana
NNNNRVMCVV
BBGKBYNNNN		 PBM
Weirauch et al.(2014)
pTH7337 		0.953 0.290
TCP24
M07272_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP24_colamp_a 		0.953 0.290
TCP24
M07273_2.00 		Arabidopsis thaliana
NNBGGGACCACH
DGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
TCP24_col 		0.953 0.290
TCP24
M02506_2.00 		Arabidopsis lyrata
NBKKNNMMVN
NBKKNNMMVN		 PBM
Weirauch et al.(2014)
pTH9227 		0.952 0.285
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA025162-PA TCP 59 199
BGIOSGA025162-PA TCP 317 410

Links

Other TCP family TFs
Other Oryza indica TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CGGC5_4445 Colletotrichum gloeosporioides CGGC5_4445 N
FGRRES_03322 Fusarium graminearum FGRRES_03322 N
FPSE_10432 Fusarium pseudograminearum FPSE_10432 N
NechaG105641 Fusarium solani NechaG105641 N
PMAA_026980 Talaromyces marneffei PMAA_026980 N
PV04_09739 Capronia semiimmersa PV04_09739 N
PV07_05801 Cladophialophora immunda PV07_05801 N
Z517_06958 Fonsecaea pedrosoi Z517_06958 N
estExt_fgenesh1_pm.C_sca_39_chr11_5_00049 Nectria haematococca estExt_fgenesh1_pm.C_sca_39_chr11_5_00049 N
PMAA_026980 Penicillium marneffei PMAA_026980 N
PMAA_051670 Penicillium marneffei PMAA_051670 N