Bo1g019520 (Brassica oleracea)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Bo1g019520 T343721_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.968 0.836
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.967 0.820
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.958 0.719
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.892 0.375
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.885 0.352
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.885 0.352
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.885 0.352
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.882 0.375
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.882 0.375
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.875 0.383
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.851 0.359
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.850 0.344
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.844 0.359
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.844 0.359
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g019520.1 TCP 49 176

Links

Other TCP family TFs
Other Brassica oleracea TFs

421 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orf19.801 Candida albicans orf19.801 D
GNLVRS01_PISO0K21658g Millerozyma farinosa GNLVRS01_PISO0K21658g I
XP_002490398.1 Pichia pastoris XP_002490398.1 I
SAKL0H07678g Lachancea kluyveri SAKL0H07678g I
Kwal_8619 Kluyveromyces waltii Kwal_8619 I
KLTH0D10164g Kluyveromyces thermotolerans KLTH0D10164g I
e_gwh1.5.1.153.1 Pichia stipitis e_gwh1.5.1.153.1 I
ZYRO0F06292g Zygosaccharomyces rouxii ZYRO0F06292g I
SPAPADRAFT_55275 Spathaspora passalidarum SPAPADRAFT_55275 I
PICST_47348 Scheffersomyces stipitis PICST_47348 I
PGUG_03851 Meyerozyma guilliermondii PGUG_03851 I
PAS_chr1-4_0281 Komagataella pastoris PAS_chr1-4_0281 I
LELG_01028 Lodderomyces elongisporus LELG_01028 I
LALA0_S10e01860g Lachancea lanzarotensis LALA0_S10e01860g I
KLTH0D10164g Lachancea thermotolerans KLTH0D10164g I
GNLVRS01_PISO0L21659g Millerozyma farinosa GNLVRS01_PISO0L21659g I
CLUG_01092 Candida lusitaniae CLUG_01092 I
G210_0538 Candida maltosa G210_0538 I
Ecym_8316 Eremothecium cymbalariae Ecym_8316 I
DEHA2C16346g Debaryomyces hansenii DEHA2C16346g I
CTRG_01572 Candida tropicalis CTRG_01572 I
CORT_0A10400 Candida orthopsilosis CORT_0A10400 I
CLUG_01092 Clavispora lusitaniae CLUG_01092 I
CD36_18830 Candida dubliniensis CD36_18830 I
CaO19.8420 Candida albicans CaO19.8420 I
CANTEDRAFT_127045 Candida tenuis CANTEDRAFT_127045 I
BN7_5968 Wickerhamomyces ciferrii BN7_5968 I
AGOS_ACR096W Ashbya gossypii AGOS_ACR096W I
AACERI_AaceriACR096W Saccharomycetaceae sp ashbya aceri AACERI_AaceriACR096W I
PGUG_03851 Candida guilliermondii PGUG_03851 I
CPAG_00784 Candida parapsilosis CPAG_00784 I