CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GLYMA07G08710 *(Glycine max)* TCP
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03634 (TCP)	IPR005333	GLYMA07G08710	T343868_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
VIT_15s0048g01150 M02515_2.00	Vitis vinifera	NNGGNCCCAC	GTGGGNCCNN	PBM Weirauch et al.(2014) pTH9294	0.974	0.687
LjSGA_053525.1 M02518_2.00	Lotus japonicus	GGNCCCAC	GTGGGNCC	PBM Weirauch et al.(2014) pTH9201	0.972	0.704
TCP9 M01086_2.00	Arabidopsis thaliana	NNGGGCCCACN	NGTGGGCCCNN	PBM Sullivan et al.(2014) pTH9796	0.972	0.687
TCP9 M07281_2.00	Arabidopsis thaliana	RTGGGDCCCAC	GTGGGHCCCAY	Dap-seq OMalley et al.(2016) At2g45680_colamp_a	0.972	0.687
TCP9 M07282_2.00	Arabidopsis thaliana	DGTGGGRCCCACDDNDNDNBN	NVNHNHNHHGTGGGYCCCACH	Dap-seq OMalley et al.(2016) At2g45680_col_b	0.972	0.687
PK14653.1 M01317_2.00	Cannabis sativa	BGGSCCCAC	GTGGGSCCV	PBM Lambert et al.(2019) pTH11324	0.970	0.670
PK14653.1 M02517_2.00	Cannabis sativa	BTGGGCCCAV	BTGGGCCCAV	PBM Weirauch et al.(2014) pTH9586	0.970	0.670
PCF2 M11399_2.00	Oryza sativa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$PCF2_01	0.962	0.591
PK13314.1 M01316_2.00	Cannabis sativa	NNGGNCCCAC	GTGGGNCCNN	PBM Lambert et al.(2019) pTH11330	0.962	0.565
TCP15 M00892_2.00	Arabidopsis thaliana	NNGGNCCCAC	GTGGGNCCNN	PBM Franco-Zorrilla et al.(2014) TCP15	0.961	0.557
TCP15 M07277_2.00	Arabidopsis thaliana	RTRGGDCCCACHH	DDGTGGGHCCYAY	Dap-seq OMalley et al.(2016) At1g69690_col_a	0.961	0.557
TCP15 M07278_2.00	Arabidopsis thaliana	RTRGGNCCCACHW	WDGTGGGNCCYAY	Dap-seq OMalley et al.(2016) At1g69690_colamp_a	0.961	0.557
TCP15 M11394_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TCP15_01	0.961	0.557
TCP19 M02504_2.00	Arabidopsis thaliana	NNGGVCCCAC	GTGGGBCCNN	PBM Weirauch et al.(2014) pTH7452	0.961	0.626
TCP14 M07289_2.00	Arabidopsis thaliana	AVADAKVDBGTGGGDCCCAC	GTGGGHCCCACVHBMTHTBT	Dap-seq OMalley et al.(2016) TCP14_col_b	0.960	0.557
fgenesh2_kg.8__1074__AT5G51910.2 M02509_2.00	Arabidopsis lyrata	GRSCCCAC	GTGGGSYC	PBM Weirauch et al.(2014) pTH9232	0.959	0.635
GLYMA19G26560 M02511_2.00	Glycine max	BGGBCCCAC	GTGGGVCCV	PBM Weirauch et al.(2014) pTH9184	0.959	0.539
PK12736.1 M01315_2.00	Cannabis sativa	NRRSCMYAYNNNNN	NNNNNRTRKGSYYN	PBM Lambert et al.(2019) pTH10121	0.958	0.548
TCP20 M02502_2.00	Arabidopsis thaliana	GGSCCCACNN	NNGTGGGSCC	PBM Weirauch et al.(2014) pTH8159	0.956	0.504
TCP20 M07285_2.00	Arabidopsis thaliana	NNNNNNNNNNGTGGGRCCCAC	GTGGGYCCCACNNNNNNNNNN	Dap-seq OMalley et al.(2016) TCP20_col_a	0.956	0.504
TCP20 M07286_2.00	Arabidopsis thaliana	RTGGGDCCCACH	DGTGGGHCCCAY	Dap-seq OMalley et al.(2016) TCP20_colamp_a	0.956	0.504
TCP20 M11397_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TCP20_01	0.956	0.504
AT-TCP20 M02507_2.00	Arabidopsis lyrata	GRSCCCAC	GTGGGSYC	PBM Weirauch et al.(2014) pTH9229	0.956	0.496
cassava45561.m1 M02516_2.00	Manihot esculenta	KGGVCCCACH	DGTGGGBCCM	PBM Weirauch et al.(2014) pTH9207	0.951	0.539
TCP8 M01311_2.00	Arabidopsis thaliana	NGGNMCCAC	GTGGKNCCN	PBM Lambert et al.(2019) pTH11569	0.950	0.513
TCP22 M07279_2.00	Arabidopsis thaliana	RTRGGNCCCACHN	NDGTGGGNCCYAY	Dap-seq OMalley et al.(2016) At1g72010_colamp_a	0.943	0.522
TCP22 M07280_2.00	Arabidopsis thaliana	RTGGGDCCCACNN	NNGTGGGHCCCAY	Dap-seq OMalley et al.(2016) At1g72010_col	0.943	0.522
TCP23 M00891_2.00	Arabidopsis thaliana	NNGGKCCCAC	GTGGGMCCNN	PBM Franco-Zorrilla et al.(2014) TCP23	0.937	0.513
OsI_08196 M02513_2.00	Oryza sativa	GGGCCCAC	GTGGGCCC	PBM Weirauch et al.(2014) pTH9274	0.931	0.470
OS02G0635800 M02512_2.00	Oryza sativa	NBGGGCCCVN	NBGGGCCCVN	PBM Weirauch et al.(2014) pTH8856	0.931	0.461
TCP21 M07292_2.00	Arabidopsis thaliana	NNRTGGGDCCCACN	NGTGGGHCCCAYNN	Dap-seq OMalley et al.(2016) At5g08330_col_a	0.931	0.487
TCP21 M07293_2.00	Arabidopsis thaliana	RTRGGDCCCACH	DGTGGGHCCYAY	Dap-seq OMalley et al.(2016) At5g08330_colamp_a	0.931	0.487
TCP7 M07294_2.00	Arabidopsis thaliana	RTGGGNCCCAC	GTGGGNCCCAY	Dap-seq OMalley et al.(2016) TCP7_col_a	0.930	0.478
TCP11 M11395_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TCP11_01	0.889	0.426
TCP11 M11396_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TCP11_02	0.889	0.426
For this family, TFs with SR scores > 0.822* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
GLYMA07G08710.2	TCP	69	208	ASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSPSDQEPGDQPERKKRKRPANSAYVDINDAAVSISTGLASSNNNNQNAATTTTMTIPQHTA

Links
Other TCP family TFs
Other *Glycine max* TFs

653 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
THAP2	Sorex araneus	ENSSARG00000010362	N
THAP2	Otolemur garnettii	ENSOGAG00000027278	N
THAP2	Ochotona princeps	ENSOPRG00000013944	N
THAP2	Procavia capensis	ENSPCAG00000003970	N
ENSPPYG00000004774	Pongo abelii	ENSPPYG00000004774	N
ENSPSIG00000012990	Pelodiscus sinensis	ENSPSIG00000012990	N
THAP2	Pan troglodytes	ENSPTRG00000005225	N
THAP2	Pteropus vampyrus	ENSPVAG00000012359	N
Thap2	Rattus norvegicus	ENSRNOG00000003993	N
THAP2	Oryctolagus cuniculus	ENSOCUG00000013308	N
THAP2	Sus scrofa	ENSSSCG00000021270	N
ENSSTOG00000002694	Ictidomys tridecemlineatus	ENSSTOG00000002694	N
THAP2	Tupaia belangeri	ENSTBEG00000016924	N
ENSTSYG00000005486	Tarsius syrichta	ENSTSYG00000005486	N
THAP2	Tursiops truncatus	ENSTTRG00000007330	N
THAP2	Vicugna pacos	ENSVPAG00000010909	N
ENSBTAP00000016276-D2	Bos grunniens	ENSBTAP00000016276-D2	N
ENSMMUP00000027563	Macaca fascicularis	ENSMMUP00000027563	N
THAP2	Gorilla gorilla	ENSGGOG00000015483	N
THAP2	Bos taurus	ENSBTAG00000012271	N
THAP2	Canis familiaris	ENSCAFG00000000456	N
THAP2	Callithrix jacchus	ENSCJAG00000001382	N
THAP2	Cavia porcellus	ENSCPOG00000009524	N
ENSCSAG00000004092	Chlorocebus sabaeus	ENSCSAG00000004092	N
ENSDNOG00000049696	Dasypus novemcinctus	ENSDNOG00000049696	N
Thap2	Dipodomys ordii	ENSDORG00000006270	N
THAP2	Homo sapiens	ENSG00000173451	N
ENSAMEG00000000496	Ailuropoda melanoleuca	ENSAMEG00000000496	N
ENSLACG00000005196	Latimeria chalumnae	ENSLACG00000005196	N
ENSMEUG00000015495	Macropus eugenii	ENSMEUG00000015495	N
THAP2	Myotis lucifugus	ENSMLUG00000004164	N
ENSMMUG00000020946	Macaca mulatta	ENSMMUG00000020946	N
ENSMPUG00000017487	Mustela putorius furo	ENSMPUG00000017487	N
ENSMPUG00000019081	Mustela putorius furo	ENSMPUG00000019081	N
Thap2	Mus musculus	ENSMUSG00000020137	N
ENSOARG00000014616	Ovis aries	ENSOARG00000014616	N

GLYMA07G08710 (Glycine max) TCP

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

653 Related TFs

GLYMA07G08710 **(Glycine max)
TCP**