GSMUA_Achr5G06660_001 (Musa acuminata)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 GSMUA_Achr5G06660_001 T343971_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.953 0.631
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.952 0.631
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.948 0.541
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.948 0.541
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.948 0.541
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.934 0.550
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.891 0.432
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.890 0.432
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.888 0.423
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.874 0.405
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.867 0.450
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.867 0.450
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.845 0.378
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.837 0.378
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr5P06660_001 TCP 164 354

Links

Other TCP family TFs
Other Musa acuminata TFs

419 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZBTB26 Homo sapiens ENSG00000171448 D
ENSXMAG00000019575 Xiphophorus maculatus ENSXMAG00000019575 I
ZBTB26 Procavia capensis ENSPCAG00000010332 I
ENSPFOG00000001590 Poecilia formosa ENSPFOG00000001590 I
ENSPPYG00000019585 Pongo abelii ENSPPYG00000019585 I
ENSPSIG00000001041 Pelodiscus sinensis ENSPSIG00000001041 I
ZBTB26 Pan troglodytes ENSPTRG00000021341 I
ZBTB26 Pteropus vampyrus ENSPVAG00000017595 I
Zbtb26 Rattus norvegicus ENSRNOG00000009346 I
ENSSHAG00000008190 Sarcophilus harrisii ENSSHAG00000008190 I
ENSSSCG00000005577 Sus scrofa ENSSSCG00000005577 I
ENSSSCG00000005580 Sus scrofa ENSSSCG00000005580 I
ENSSTOG00000004739 Ictidomys tridecemlineatus ENSSTOG00000004739 I
ZBTB26 Taeniopygia guttata ENSTGUG00000018200 I
si:ch211-236k19.4 Tetraodon nigroviridis ENSTNIG00000011438 I
ZBTB26 Tursiops truncatus ENSTTRG00000016957 I
ENSPANG00000025839 Papio anubis ENSPANG00000025839 I
Aan_R009401 Calypte anna Aan_R009401 I
Afo_R013761 Aptenodytes forsteri Afo_R013761 I
Brh_R009359 Buceros rhinoceros Brh_R009359 I
Cmyd_10017122 Chelonia mydas Cmyd_10017122 I
ENSBTAP00000040938-D2 Bos grunniens ENSBTAP00000040938-D2 I
ENSBTAP00000052774-D5 Bos grunniens ENSBTAP00000052774-D5 I
ENSP00000362760 Macaca fascicularis ENSP00000362760 I
Gfo_R007917 Geospiza fortis Gfo_R007917 I
Myotis_brandtii_ZBTB26_10028431 Myotis brandtii Myotis_brandtii_ZBTB26_10028431 I
Ogr13905 Ophisaurus gracilis Ogr13905 I
Pvit_08508 Pogona vitticeps Pvit_08508 I
Tal_R003614 Tyto alba Tal_R003614 I
zbtb26 Xenopus tropicalis XB-GENE-5891654 I
ENSGMOG00000002798 Gadus morhua ENSGMOG00000002798 I
ENSAPLG00000001864 Anas platyrhynchos ENSAPLG00000001864 I
ZBTB26 Bos taurus ENSBTAG00000038610 I
ZBTB26 Callithrix jacchus ENSCJAG00000021770 I
ENSCSAG00000019712 Chlorocebus sabaeus ENSCSAG00000019712 I
ZBTB26 Danio rerio ENSDARG00000028949 I
ZBTB26 Dasypus novemcinctus ENSDNOG00000045813 I
Zbtb26 Dipodomys ordii ENSDORG00000006402 I
ZBTB26 Equus caballus ENSECAG00000017397 I
ZBTB26 Echinops telfairi ENSETEG00000009868 I
ENSFALG00000014341 Ficedula albicollis ENSFALG00000014341 I
si:ch211-236k19.4 Gasterosteus aculeatus ENSGACG00000013351 I
ENSGALG00000001236 Gallus gallus ENSGALG00000001236 I
ZBTB26 Gorilla gorilla ENSGGOG00000015134 I
ENSAMXG00000025867 Astyanax mexicanus ENSAMXG00000025867 I
ZBTB26 Loxodonta africana ENSLAFG00000012394 I
ENSLOCG00000002911 Lepisosteus oculatus ENSLOCG00000002911 I
ENSMEUG00000015636 Macropus eugenii ENSMEUG00000015636 I
ZBTB26 Myotis lucifugus ENSMLUG00000014009 I
ZBTB26 Macaca mulatta ENSMMUG00000000495 I
ZBTB26 Monodelphis domestica ENSMODG00000023552 I
Zbtb26 Mus musculus ENSMUSG00000050714 I
ENSNLEG00000017215 Nomascus leucogenys ENSNLEG00000017215 I
ENSOARG00000019156 Ovis aries ENSOARG00000019156 I
ZBTB26 Otolemur garnettii ENSOGAG00000010685 I
ENSONIG00000020657 Oreochromis niloticus ENSONIG00000020657 I
ZBTB26 Ochotona princeps ENSOPRG00000013334 I
si:ch211-236k19.4 Oryzias latipes ENSORLG00000015695 I