GSMUA_Achr7G25320_001 (Musa acuminata)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 GSMUA_Achr7G25320_001 T343985_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.926 0.484
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.919 0.467
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.918 0.467
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.918 0.467
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.918 0.467
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.915 0.500
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.871 0.377
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.852 0.369
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.852 0.369
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.824 0.344
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.823 0.385
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.823 0.385
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr7P25320_001 TCP 33 223

Links

Other TCP family TFs
Other Musa acuminata TFs

373 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CAD26261 Encephalitozoon cuniculi CAD26261 D
SCLCIDRAFT_97512 Scleroderma citrinum SCLCIDRAFT_97512 I
NEPG_01845 Nematocida parisii ertm1 NEPG_01845 I
NERG_00880 Nematocida sp NERG_00880 I
PAXRUDRAFT_10369 Paxillus rubicundulus PAXRUDRAFT_10369 I
PHACADRAFT_257545 Phanerochaete carnosa PHACADRAFT_257545 I
PHLGIDRAFT_55548 Phlebiopsis gigantea PHLGIDRAFT_55548 I
PIIN_02203 Piriformospora indica PIIN_02203 I
PILCRDRAFT_110903 Piloderma croceum PILCRDRAFT_110903 I
PLEOSDRAFT_173849 Pleurotus ostreatus PLEOSDRAFT_173849 I
POSPLDRAFT_98870 Postia placenta POSPLDRAFT_98870 I
NCER_100211 Nosema ceranae NCER_100211 I
SERLA73DRAFT_72643 Serpula lacrymans SERLA73DRAFT_72643 I
THOM_0497 Trachipleistophora hominis THOM_0497 I
VCUG_00708 Vavraia culicis VCUG_00708 I
fgenesh1_pg.C_scaffold_15000074 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_15000074 I
ANCCAN_23047 Ancylostoma caninum ANCCAN_23047 I
HPLM_0001444701 Haemonchus placei HPLM_0001444701 I
NECAME_18596 Necator americanus NECAME_18596 I
NECAME_18614 Necator americanus NECAME_18614 I
OESDEN_04863 Oesophagostomum dentatum OESDEN_04863 I
SVUK_0001440601 Strongylus vulgaris SVUK_0001440601 I
LACBIDRAFT_293988 Laccaria bicolor LACBIDRAFT_293988 I
CC1G_01962 Coprinopsis cinerea CC1G_01962 I
CY34DRAFT_106181 Suillus luteus CY34DRAFT_106181 I
EHEL_031090 Encephalitozoon hellem EHEL_031090 I
Eint_031070 Encephalitozoon intestinalis Eint_031070 I
EROM_031050 Encephalitozoon romaleae EROM_031050 I
FOMPIDRAFT_1128018 Fomitopsis pinicola FOMPIDRAFT_1128018 I
GALMADRAFT_211191 Galerina marginata GALMADRAFT_211191 I
JAAARDRAFT_47621 Jaapia argillacea JAAARDRAFT_47621 I
K443DRAFT_127593 Laccaria amethystina K443DRAFT_127593 I
NBO_85g0005 Nosema bombycis NBO_85g0005 I
M378DRAFT_8263 Amanita muscaria M378DRAFT_8263 I
M404DRAFT_74218 Pisolithus tinctorius M404DRAFT_74218 I
M408DRAFT_258951 Serendipita vermifera M408DRAFT_258951 I
M413DRAFT_413744 Hebeloma cylindrosporum M413DRAFT_413744 I
M896_030550 Ordospora colligata M896_030550 I
Moror_6758 Moniliophthora roreri Moror_6758 I
NAPIS_ORF00184 Nosema apis NAPIS_ORF00184 I
NBO_11g0012 Nosema bombycis NBO_11g0012 I
NBO_6g0031 Nosema bombycis NBO_6g0031 I