MLOC_68285 (Hordeum vulgare)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 MLOC_68285 T344026_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.958 0.607
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.943 0.562
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.941 0.562
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.938 0.527
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.938 0.527
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.938 0.527
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.893 0.446
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.891 0.411
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.884 0.420
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.884 0.420
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.879 0.420
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.875 0.429
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.875 0.429
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.872 0.402
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.831 0.366
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.831 0.366
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_68285.1 TCP 85 306
MLOC_68285.2 TCP 85 306

Links

Other TCP family TFs
Other Hordeum vulgare TFs

441 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Terb1 Mus musculus ENSMUSG00000052616 N
ENSP00000398602 Macaca fascicularis ENSP00000398602 N
ENSBTAP00000032300-D1 Bos grunniens ENSBTAP00000032300-D1 N
ENSSTOG00000007763 Ictidomys tridecemlineatus ENSSTOG00000007763 N
Terb1 Rattus norvegicus ENSRNOG00000055097 N
TERB1 Pan troglodytes ENSPTRG00000008201 N
ENSPANG00000019280 Papio anubis ENSPANG00000019280 N
TERB1 Otolemur garnettii ENSOGAG00000013265 N
ENSOARG00000002232 Ovis aries ENSOARG00000002232 N
ENSNLEG00000004017 Nomascus leucogenys ENSNLEG00000004017 N
TERB1 Bos taurus ENSBTAG00000016438 N
TERB1 Loxodonta africana ENSLAFG00000009064 N
TERB1 Gorilla gorilla ENSGGOG00000003333 N
TERB1 Homo sapiens ENSG00000249961 N
TERB1 Felis catus ENSFCAG00000027927 N
ENSDNOG00000032686 Dasypus novemcinctus ENSDNOG00000032686 N
TERB1 Cavia porcellus ENSCPOG00000015414 N
TERB1 Callithrix jacchus ENSCJAG00000016748 N
TERB1 Canis familiaris ENSCAFG00000020407 N