MTR_2g090960 (Medicago truncatula)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 MTR_2g090960 T344038_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.951 0.578
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.951 0.552
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.951 0.552
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.951 0.552
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.948 0.569
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.943 0.560
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.905 0.474
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.894 0.431
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.886 0.422
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.864 0.405
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.851 0.397
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.850 0.414
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.850 0.414
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.840 0.353
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH39232 TCP 22 201

Links

Other TCP family TFs
Other Medicago truncatula TFs

423 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCU08658 Neurospora crassa NCU08658 D
SMAC_03743 Sordaria macrospora SMAC_03743 I
A1O1_02670 Capronia coronata A1O1_02670 I
NEUTE1DRAFT_39574 Neurospora tetrasperma NEUTE1DRAFT_39574 I
OIDMADRAFT_42277 Oidiodendron maius OIDMADRAFT_42277 I
PV04_09333 Capronia semiimmersa PV04_09333 I
PV06_05113 Exophiala oligosperma PV06_05113 I
PV07_08856 Cladophialophora immunda PV07_08856 I
PV08_09084 Exophiala spinifera PV08_09084 I
PV09_06702 Verruconis gallopava PV09_06702 I
PV10_04981 Exophiala mesophila PV10_04981 I
SEPMUDRAFT_92213 Sphaerulina musiva SEPMUDRAFT_92213 I
Mycgr3G11650 Zymoseptoria tritici Mycgr3G11650 I
THITE_11494 Thielavia terrestris THITE_11494 I
TRIATDRAFT_13008 Trichoderma atroviride TRIATDRAFT_13008 I
V499_01659 Pseudogymnoascus pannorum V499_01659 I
Z518_05201 Rhinocladiella mackenziei Z518_05201 I
estExt_fgenesh2_pg.C_30094 Neurospora discreta estExt_fgenesh2_pg.C_30094 I
gw1.10.415.1 Mycosphaerella fijiensis gw1.10.415.1 I
gw1.9.126.1 Mycosphaerella graminicola gw1.9.126.1 I
e_gw1.3.1365.1 Cryphonectria parasitica e_gw1.3.1365.1 I
COCVIDRAFT_20649 Bipolaris victoriae COCVIDRAFT_20649 I
A1O3_05241 Capronia epimyces A1O3_05241 I
A1O7_08749 Cladophialophora yegresii A1O7_08749 I
A1O9_09993 Exophiala aquamarina A1O9_09993 I
BAUCODRAFT_79055 Baudoinia compniacensis BAUCODRAFT_79055 I
BBA_07071 Beauveria bassiana BBA_07071 I
BGHDH14_bgh01598 Blumeria graminis BGHDH14_bgh01598 I
CHGG_04995 Chaetomium globosum CHGG_04995 I
COCMIDRAFT_22555 Bipolaris oryzae COCMIDRAFT_22555 I
MYCFIDRAFT_107799 Pseudocercospora fijiensis MYCFIDRAFT_107799 I
DEHA2D16016g Debaryomyces hansenii DEHA2D16016g I
DOTSEDRAFT_158220 Dothistroma septosporum DOTSEDRAFT_158220 I
EPUS_00566 Endocarpon pusillum EPUS_00566 I
G647_07724 Cladophialophora carrionii G647_07724 I
GMDG_04293 Pseudogymnoascus destructans GMDG_04293 I
HMPREF1120_01122 Exophiala dermatitidis HMPREF1120_01122 I
HMPREF1541_03778 Cyphellophora europaea HMPREF1541_03778 I
MGG_05153 Magnaporthe oryzae MGG_05153 I
CANTEDRAFT_92253 Candida tenuis CANTEDRAFT_92253 N
PV06_04157 Exophiala oligosperma PV06_04157 N
PV05_04579 Exophiala xenobiotica PV05_04579 N
Z519_03632 Cladophialophora bantiana Z519_03632 N
KUCA_T00003157001 Kuraishia capsulata KUCA_T00003157001 N
A1O5_05518 Cladophialophora psammophila A1O5_05518 N